About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_024974-T1ADENINE PHOSPHORIBOSYLTRANSFERASE
LLU|FUN_024975-T1MACROGLOBULIN / COMPLEMENT
LLU|FUN_024976-T15'-NUCLEOTIDASE-RELATED
LLU|FUN_024977-T1MITOCHONDRIAL DIVISION PROTEIN 1-RELATED
LLU|FUN_024978-T1TYPE-1 ANGIOTENSIN II RECEPTOR-ASSOCIATED PROTEIN
LLU|FUN_024979-T1ALDO/KETO REDUCTASE
LLU|FUN_024980-T1
LLU|FUN_024981-T1MACROGLOBULIN / COMPLEMENT
LLU|FUN_024982-T1
LLU|FUN_024983-T1MACROGLOBULIN / COMPLEMENT
LLU|FUN_024984-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_024985-T1
LLU|FUN_024986-T1
LLU|FUN_024987-T1MADF DOMAIN TRANSCRIPTION FACTOR
LLU|FUN_024988-T1
LLU|FUN_024989-T1
LLU|FUN_024990-T1
LLU|FUN_024991-T1EPHRIN TYPE-B RECEPTOR
LLU|FUN_024992-T1
LLU|FUN_024993-T1PROTEIN REQUIRED FOR HYPHAL ANASTOMOSIS HAM-2
LLU|FUN_024994-T1SMALL LYSINE-RICH PROTEIN 1
LLU|FUN_024995-T1
LLU|FUN_024996-T1
LLU|FUN_024997-T1
LLU|FUN_024998-T1ADENOSYLHOMOCYSTEINASE
LLU|FUN_025000-T1NUCLEAR RESPIRATORY FACTOR 1
LLU|FUN_025001-T1
LLU|FUN_025002-T1
LLU|FUN_025003-T1CONTACTIN 5
LLU|FUN_025004-T1CALCIUM-INDEPENDENT PHOSPHOLIPASE A2-GAMMA
LLU|FUN_025005-T1
LLU|FUN_025006-T1VASCULAR CELL ADHESION MOLECULE 1
LLU|FUN_025007-T1
LLU|FUN_025008-T1
LLU|FUN_025009-T1
LLU|FUN_025010-T1
LLU|FUN_025011-T1
LLU|FUN_025012-T1
LLU|FUN_025013-T1
LLU|FUN_025014-T1
LLU|FUN_025015-T1
LLU|FUN_025016-T1
LLU|FUN_025017-T1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
LLU|FUN_025018-T1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
LLU|FUN_025019-T1
LLU|FUN_025020-T1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
LLU|FUN_025021-T1AGAP007109-PA
LLU|FUN_025022-T1
LLU|FUN_025023-T1GLYPICAN
LLU|FUN_025024-T1
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