About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_026222-T1
OS493_026223-T1SERINE/THREONINE-PROTEIN KINASE 17
OS493_026224-T1SERINE/THREONINE-PROTEIN KINASE 17
OS493_026225-T1DISKS LARGE HOMOLOG 5
OS493_026226-T1
OS493_026227-T1
OS493_026228-T1
OS493_026229-T1
OS493_026230-T1G-PROTEIN COUPLED RECEPTOR 158-RELATED
OS493_026231-T1
OS493_026232-T1G-PROTEIN COUPLED RECEPTOR 158-RELATED
OS493_026233-T1F-BOX/WD REPEAT-CONTAINING PROTEIN 2
OS493_026234-T1ELONGATOR COMPLEX PROTEIN 6
OS493_026235-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_026236-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_026237-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_026238-T1
OS493_026239-T1
OS493_026240-T1
OS493_026241-T1
OS493_026242-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_026243-T1
OS493_026244-T1
OS493_026245-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_026246-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_026247-T1ELONGATOR COMPLEX PROTEIN 6
OS493_026248-T1
OS493_026249-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_026250-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_026251-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_026252-T1
OS493_026253-T1
OS493_026255-T1DNA HELICASE RECQ FAMILY MEMBER
OS493_026256-T1
OS493_026257-T1
OS493_026258-T1OPSIN
OS493_026259-T1
OS493_026260-T1
OS493_026261-T1SERINE-THREONINE PROTEIN KINASE
OS493_026262-T1
OS493_026263-T1SERINE-THREONINE PROTEIN KINASE
OS493_026264-T1
OS493_026265-T1
OS493_026266-T1
OS493_026267-T1
OS493_026268-T1
OS493_026269-T1
OS493_026270-T1OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
OS493_026271-T1
OS493_026272-T1
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