About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.

Classification

Animalia (Kingdom); Cnidaria (Phylum); Anthozoa (Subphylum); Hexacorallia (Class); Scleractinia (Order); Vacatina (Suborder); Caryophylliidae (Family); Lophelia (Genus); Lophelia pertusa (Species)

Original Name

Madrepora pertusa Linnaeus, 1758

Key Reference Paper

1. Linnaeus C. Systema Naturae per regna tria naturae, secundum classes, ordines, genera, species; cum characteribus, differentiis, synonymis, locis[M]. apud JB Delamolliere, 1789. (Linnaeus et al., 1789)

Distribution

Nova Scotia south to New Jersey. Depth range 39-2775 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90 1,600/438.639.457.3737,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 482 483 484 485 486 487 488 489 490 491 Forward> Last>>        1875 pages in total

Gene IDDescription
OS493_010512-T1VOLTAGE-GATED POTASSIUM CHANNEL
OS493_010513-T1UNCHARACTERIZED
OS493_010514-T1G PROTEIN-COUPLED RECEPTOR
OS493_010515-T1STRAWBERRY NOTCH-RELATED
OS493_010516-T1STRAWBERRY NOTCH-RELATED
OS493_010517-T1CALCIUM HOMEOSTASIS MODULATOR PROTEIN
OS493_010519-T1DIHYDRODIPICOLINATE SYNTHASE
OS493_010520-T1UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3
OS493_010521-T1-
OS493_010522-T1ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT
OS493_010523-T1-
OS493_010524-T1INTERFERON-INDUCED PROTEIN 44
OS493_010525-T1-
OS493_010526-T1-
OS493_010527-T1-
OS493_010528-T1INTERFERON-INDUCED PROTEIN 44
OS493_010529-T1-
OS493_010530-T1ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT
OS493_010531-T1UNCHARACTERIZED
OS493_010532-T1UNCHARACTERIZED
TOP