About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_026114-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_026115-T1
OS493_026116-T1
OS493_026117-T1THIOSULFATE SULFURTRANSFERASE RDL2, MITOCHONDRIAL-RELATED
OS493_026118-T1DEAD/H BOX POLYPEPTIDE 26/DICE1-RELATED
OS493_026119-T1DYNEIN HEAVY CHAIN
OS493_026120-T1DYNEIN HEAVY CHAIN
OS493_026121-T1THIOSULFATE SULFURTRANSFERASE RDL2, MITOCHONDRIAL-RELATED
OS493_026122-T1DEAD/H BOX POLYPEPTIDE 26/DICE1-RELATED
OS493_026123-T1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 35
OS493_026125-T1TRYPSIN-RELATED
OS493_026126-T1ACROSIN-RELATED
OS493_026127-T1CENTROSOMAL PROTEIN 2
OS493_026128-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_026129-T1
OS493_026130-T1
OS493_026131-T1
OS493_026132-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_026133-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_026138-T1
OS493_026139-T1
OS493_026142-T1
OS493_026143-T1
OS493_026144-T1
OS493_026145-T1
OS493_026146-T1
OS493_026147-T1ADP-RIBOSYL CYCLASE
OS493_026148-T1SODIUM/DICARBOXYLATE SYMPORTER-RELATED
OS493_026149-T1
OS493_026150-T1
OS493_026151-T1
OS493_026152-T1
OS493_026153-T1
OS493_026154-T1
OS493_026155-T1
OS493_026156-T1SODIUM/DICARBOXYLATE SYMPORTER-RELATED
OS493_026157-T1SODIUM/DICARBOXYLATE SYMPORTER-RELATED
OS493_026158-T1SODIUM/DICARBOXYLATE SYMPORTER-RELATED
OS493_026159-T1SODIUM/DICARBOXYLATE SYMPORTER-RELATED
OS493_026160-T1SODIUM/DICARBOXYLATE SYMPORTER-RELATED
OS493_026161-T1SODIUM/DICARBOXYLATE SYMPORTER-RELATED
OS493_026162-T1PHOSPHOLIPASE A2 FAMILY MEMBER
OS493_026163-T1
OS493_026164-T1PHOSPHOLIPASE A2 FAMILY MEMBER
OS493_026165-T1
OS493_026166-T1
OS493_026167-T1PHOSPHOLIPASE A2 FAMILY MEMBER
OS493_026168-T1SODIUM/DICARBOXYLATE SYMPORTER-RELATED
OS493_026169-T1
OS493_026170-T1
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