About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_025839-T1LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN
OS493_025840-T1OVOCHYMASE-RELATED
OS493_025841-T1OPSIN
OS493_025842-T1CARBOHYDRATE SULFOTRANSFERASE
OS493_025843-T1OVOCHYMASE-RELATED
OS493_025844-T1OVOCHYMASE-RELATED
OS493_025845-T1NUDIX HYDROLASE, NUDC SUBFAMILY
OS493_025846-T1
OS493_025847-T1
OS493_025848-T1OVOCHYMASE-RELATED
OS493_025849-T1OVOCHYMASE-RELATED
OS493_025850-T1COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED
OS493_025851-T1
OS493_025852-T1OVOCHYMASE-RELATED
OS493_025853-T1
OS493_025854-T1OVOCHYMASE-RELATED
OS493_025855-T1OVOCHYMASE-RELATED
OS493_025856-T1
OS493_025857-T1
OS493_025858-T1OVOCHYMASE-RELATED
OS493_025859-T1OVOCHYMASE-RELATED
OS493_025860-T1OVOCHYMASE-RELATED
OS493_025861-T1
OS493_025862-T1OVOCHYMASE-RELATED
OS493_025863-T1OVOCHYMASE-RELATED
OS493_025864-T1OVOCHYMASE-RELATED
OS493_025865-T1OVOCHYMASE-RELATED
OS493_025866-T1OVOCHYMASE-RELATED
OS493_025867-T1
OS493_025868-T1UNCHARACTERIZED
OS493_025870-T1UNCHARACTERIZED
OS493_025872-T1MYOSIN LIGHT CHAIN 1, 3
OS493_025873-T1CXC2 DOMAIN-CONTAINING PROTEIN
OS493_025874-T1
OS493_025875-T1FIBROBLAST GROWTH FACTOR
OS493_025876-T1OVOCHYMASE-RELATED
OS493_025879-T1
OS493_025880-T1NEUROTRANSMITTER GATED ION CHANNEL
OS493_025881-T1NEUROTRANSMITTER GATED ION CHANNEL
OS493_025882-T1FERM AND PDZ DOMAIN-CONTAINING PROTEIN FAMILY MEMBER
OS493_025883-T1CARBONIC ANHYDRASE
OS493_025884-T1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
OS493_025885-T1
OS493_025886-T1
OS493_025887-T1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
OS493_025888-T1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
OS493_025889-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
OS493_025890-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
OS493_025891-T1
OS493_025892-T1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
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