About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides00969REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides009705-OXOPROLINASE RELATED
Paelopatides00971BYSTIN
Paelopatides00972-
Paelopatides00973-
Paelopatides00974FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides00975PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides00976-
Paelopatides00977OS11G0677101 PROTEIN
Paelopatides00978ANKYRIN REPEAT PROTEIN
Paelopatides00979-
Paelopatides00980PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides00982MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINS
Paelopatides00983-
Paelopatides00984SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides00985-
Paelopatides00986-
Paelopatides00987-
Paelopatides00988REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00990CXC DOMAIN-CONTAINING PROTEIN-RELATED
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