About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides00867BETA1,4 MANNOSYLTRANSFERASE
Paelopatides00868ANNEXIN
Paelopatides00869-
Paelopatides00870L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides008715-HYDROXYTRYPTAMINE RECEPTOR
Paelopatides00872-
Paelopatides00873-
Paelopatides00874TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides00875SI:CH211-108C17.2-RELATED-RELATED
Paelopatides00876REVERSE TRANSCRIPTASES
Paelopatides00877SERINE/THREONINE-PROTEIN KINASE PLK
Paelopatides00878NEUROPEPTIDE Y RECEPTOR
Paelopatides00879FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides00880-
Paelopatides00881GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides00882CENTROSOMAL PROTEIN OF 290 KDA
Paelopatides00883CENTROSOMAL PROTEIN OF 290 KDA
Paelopatides00884CXXC-TYPE ZINC FINGER PROTEIN 1
Paelopatides00885-
Paelopatides00886-
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