About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides00824HL07962P-RELATED
Paelopatides00825REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00826HISTIDINE-RICH GLYCOPROTEIN
Paelopatides00827LIPASE MATURATION FACTOR
Paelopatides00828MITOCHONDRIAL RIBOSOMAL PROTEIN L48
Paelopatides00829AGAP007712-PA
Paelopatides00830AGAP007712-PA
Paelopatides00831DIMETHYLANILINE MONOOXYGENASE
Paelopatides00832FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides00833-
Paelopatides00834REVERSE TRANSCRIPTASES
Paelopatides00835RRP15-LIKE PROTEIN
Paelopatides00836HEART DEVELOPMENT PROTEIN WITH EGF-LIKE DOMAINS 1
Paelopatides00837-
Paelopatides00838GTP-BINDING
Paelopatides00839GTP-BINDING
Paelopatides00840HOMEOBOX PROTEIN NKX
Paelopatides00841STEROL DESATURASE
Paelopatides00843NETRIN RECEPTOR UNC5
Paelopatides00844-
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