About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides00722-
Paelopatides00723-
Paelopatides00724LEUCOKININ RECEPTOR-RELATED
Paelopatides00725-
Paelopatides00726L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides00727-
Paelopatides00728-
Paelopatides00729-
Paelopatides00730SELENOPROTEIN F
Paelopatides00731KELCH PROTEIN
Paelopatides00732-
Paelopatides00733PROTEIN CBG26694
Paelopatides00734BUCENTAUR RELATED
Paelopatides00735FACT COMPLEX SUBUNIT SSRP1
Paelopatides00736-
Paelopatides00737-
Paelopatides00738ENDONUCLEASE
Paelopatides00739NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides00740APPLE DOMAIN-CONTAINING PROTEIN
Paelopatides00741NXPE FAMILY MEMBER
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