About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides00762-
Paelopatides00763RIBOSOMAL RNA PROCESSING PROTEIN 7-RELATED
Paelopatides00764REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00765UNCHARACTERIZED
Paelopatides00766-
Paelopatides00767ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides00768-
Paelopatides00769-
Paelopatides00770MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides00771DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Paelopatides00772-
Paelopatides00773-
Paelopatides00774ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides00775ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides00776-
Paelopatides00778SI:DKEY-256H2.1
Paelopatides00779SI:DKEY-256H2.1
Paelopatides00781-
Paelopatides00782BUCENTAUR RELATED
Paelopatides00783HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
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