About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides00661PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides00662-
Paelopatides00663-
Paelopatides00664FATTY ACID ACYL TRANSFERASE-RELATED
Paelopatides00665ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI
Paelopatides00666-
Paelopatides00667SUPPRESSOR OF TY 5
Paelopatides00668-
Paelopatides00669-
Paelopatides00670HEME-BINDING PROTEIN-RELATED
Paelopatides00671-
Paelopatides00672FERROCHELATASE
Paelopatides00673MUCIN-22
Paelopatides00674SCAVENGER RECEPTOR DOMAIN-CONTAINING
Paelopatides00675SI:CH211-196P9.1-RELATED
Paelopatides00676LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
Paelopatides00677PARANEOPLASTIC ANTIGEN
Paelopatides00678PROTEIN CBG26694
Paelopatides00679LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Paelopatides00680TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
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