About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides00949REVERSE TRANSCRIPTASES
Paelopatides00950-
Paelopatides00951-
Paelopatides00952PROTEIN CBG26694
Paelopatides00953-
Paelopatides00954-
Paelopatides00955POL PROTEIN
Paelopatides00956ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides00957REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00958-
Paelopatides00959-
Paelopatides00960TORSIN-1A-INTERACTING PROTEIN
Paelopatides00961CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED
Paelopatides00962PARANEOPLASTIC ANTIGEN
Paelopatides00963PROTEIN CBG26694
Paelopatides00964-
Paelopatides00965IONOTROPIC GLUTAMATE RECEPTOR
Paelopatides00966ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED
Paelopatides00967ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
Paelopatides00968CXC DOMAIN-CONTAINING PROTEIN-RELATED
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