About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 460 461 462 463 464 465 466 467 468 469 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_025033-T1
OS493_025034-T1TNF RECEPTOR ASSOCIATED FACTOR
OS493_025035-T1
OS493_025036-T1
OS493_025037-T1
OS493_025038-T1
OS493_025039-T1
OS493_025041-T1HIGH-AFFINITY CHOLINE TRANSPORT PROTEIN-RELATED
OS493_025042-T1VOLTAGE-GATED POTASSIUM CHANNEL
OS493_025043-T1VOLTAGE-GATED POTASSIUM CHANNEL
OS493_025044-T1VOLTAGE-GATED POTASSIUM CHANNEL
OS493_025046-T1VOLTAGE-GATED POTASSIUM CHANNEL
OS493_025047-T1
OS493_025048-T1VOLTAGE-GATED POTASSIUM CHANNEL
OS493_025049-T1ARMADILLO-LIKE HELICAL DOMAIN CONTAINING PROTEIN 1
OS493_025050-T1
OS493_025051-T1SPINDLE AND CENTRIOLE ASSOCIATED PROTEIN 1 SPICE1
OS493_025052-T1SIGNAL RECOGNITION PARTICLE 19 KD PROTEIN
OS493_025053-T1CENTROSOMAL PROTEIN OF 78 KDA
OS493_025054-T1VOLTAGE-GATED POTASSIUM CHANNEL
OS493_025055-T1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
OS493_025056-T1
OS493_025057-T1
OS493_025058-T1LEUCOKININ RECEPTOR-RELATED
OS493_025059-T1MULTIPLE PDZ DOMAIN PROTEIN
OS493_025060-T1
OS493_025061-T1
OS493_025064-T1DNAJ HOMOLOG SUBFAMILY C MEMBER 14
OS493_025065-T1DNAJ HOMOLOG SUBFAMILY C MEMBER 14
OS493_025066-T1
OS493_025067-T1
OS493_025068-T1N-LINKED OLIGOSACCHARIDE PROCESSING
OS493_025069-T1HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN
OS493_025070-T1KINESIN-RELATED PROTEIN 6
OS493_025072-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
OS493_025073-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
OS493_025074-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
OS493_025075-T1LEG1
OS493_025076-T1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
OS493_025077-T1
OS493_025078-T1MULTI-COPPER OXIDASE
OS493_025079-T1OS02G0815200 PROTEIN
OS493_025082-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
OS493_025084-T1
OS493_025085-T1T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
OS493_025086-T1T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
OS493_025087-T1T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
OS493_025088-T1NANOS PROTEIN
OS493_025089-T1T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
OS493_025090-T1T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
TOP