About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.

Classification

Animalia (Kingdom); Cnidaria (Phylum); Anthozoa (Subphylum); Hexacorallia (Class); Scleractinia (Order); Vacatina (Suborder); Caryophylliidae (Family); Lophelia (Genus); Lophelia pertusa (Species)

Original Name

Madrepora pertusa Linnaeus, 1758

Key Reference Paper

1. Linnaeus C. Systema Naturae per regna tria naturae, secundum classes, ordines, genera, species; cum characteribus, differentiis, synonymis, locis[M]. apud JB Delamolliere, 1789. (Linnaeus et al., 1789)

Distribution

Nova Scotia south to New Jersey. Depth range 39-2775 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90 1,600/438.639.457.3737,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 461 462 463 464 465 466 467 468 469 470 Forward> Last>>        1875 pages in total

Gene IDDescription
OS493_010071-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
OS493_010072-T1MOLTING PROTEIN MLT-4
OS493_010073-T1PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
OS493_010074-T1-
OS493_010075-T1-
OS493_010076-T1-
OS493_010077-T1ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
OS493_010078-T1G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER
OS493_010079-T1PROTEIN CBG13728
OS493_010080-T1-
OS493_010081-T1PROTEIN CBG13728
OS493_010082-T1TNF RECEPTOR ASSOCIATED FACTOR
OS493_010083-T1SMALL INTEGRAL MEMBRANE PROTEIN 15
OS493_010084-T1EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN
OS493_010085-T1TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
OS493_010086-T1GUANINE NUCLEOTIDE EXCHANGE FACTOR
OS493_010087-T1SERINE/THREONINE-PROTEIN KINASE RIO1
OS493_010088-T1REGULATORY PROTEIN ZESTE
OS493_010089-T1REGULATORY PROTEIN ZESTE
OS493_010090-T1-
TOP