About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_021077-T1
LLU|FUN_021078-T1DYNACTIN SUBUNIT
LLU|FUN_021079-T1SERINE/THREONINE-PROTEIN KINASE 16
LLU|FUN_021080-T1MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
LLU|FUN_021081-T1DELETED IN LUNG AND ESOPHAGEAL CANCER PROTEIN 1
LLU|FUN_021082-T1DELETED IN LUNG AND ESOPHAGEAL CANCER PROTEIN 1
LLU|FUN_021083-T1
LLU|FUN_021084-T1
LLU|FUN_021085-T1
LLU|FUN_021086-T1POLYCYSTIN FAMILY MEMBER
LLU|FUN_021087-T1
LLU|FUN_021088-T1POLYCYSTIN FAMILY MEMBER
LLU|FUN_021089-T1
LLU|FUN_021090-T1MEIOTIC RECOMBINATION PROTEIN REC114
LLU|FUN_021091-T1PROTEIN DISULFIDE ISOMERASE
LLU|FUN_021092-T1
LLU|FUN_021093-T1CHONDROITIN SYNTHASE
LLU|FUN_021094-T1SEC14 RELATED PROTEIN
LLU|FUN_021095-T1
LLU|FUN_021096-T1
LLU|FUN_021097-T1PORCUPINE
LLU|FUN_021098-T1FACTOR VIII-ASSOCIATED GENE 1
LLU|FUN_021099-T1ECSIT EVOLUTIONARILY CONSERVED SIGNALING INTERMEDIATE IN TOLL PATHWAYS
LLU|FUN_021100-T1
LLU|FUN_021101-T1
LLU|FUN_021102-T1
LLU|FUN_021103-T1ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED
LLU|FUN_021104-T1
LLU|FUN_021105-T1
LLU|FUN_021106-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
LLU|FUN_021107-T1ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED
LLU|FUN_021108-T1
LLU|FUN_021109-T1EPM2A-INTERACTING PROTEIN 1
LLU|FUN_021110-T1ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED
LLU|FUN_021111-T1
LLU|FUN_021112-T1
LLU|FUN_021113-T1
LLU|FUN_021114-T1
LLU|FUN_021115-T1
LLU|FUN_021116-T1
LLU|FUN_021117-T1STEREOCILIN RELATED
LLU|FUN_021118-T1
LLU|FUN_021119-T1
LLU|FUN_021120-T1
LLU|FUN_021121-T1
LLU|FUN_021122-T1
LLU|FUN_021123-T1
LLU|FUN_021124-T1
LLU|FUN_021125-T1
LLU|FUN_021126-T1INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
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