About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_021027-T1SYNAPTOTAGMIN
LLU|FUN_021028-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
LLU|FUN_021029-T1
LLU|FUN_021030-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_021031-T1
LLU|FUN_021032-T1
LLU|FUN_021033-T1
LLU|FUN_021034-T1OS10G0105400 PROTEIN
LLU|FUN_021035-T1SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
LLU|FUN_021036-T1
LLU|FUN_021037-T1S-ANTIGEN PROTEIN
LLU|FUN_021038-T1
LLU|FUN_021039-T1PROTEIN CBG24663
LLU|FUN_021040-T1
LLU|FUN_021041-T1NHL REPEAT-CONTAINING PROTEIN 2
LLU|FUN_021042-T1
LLU|FUN_021043-T1MYOSIN REGULATORY LIGHT CHAIN 2
LLU|FUN_021044-T1
LLU|FUN_021045-T1
LLU|FUN_021046-T1METHYLTRANSFERASE
LLU|FUN_021047-T1
LLU|FUN_021048-T1
LLU|FUN_021049-T1
LLU|FUN_021050-T1RAN GTPASE-ACTIVATING PROTEIN 1
LLU|FUN_021051-T1METHYLTRANSFERASE
LLU|FUN_021052-T1
LLU|FUN_021053-T1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
LLU|FUN_021054-T1
LLU|FUN_021055-T1
LLU|FUN_021056-T1
LLU|FUN_021057-T1
LLU|FUN_021058-T1
LLU|FUN_021059-T1
LLU|FUN_021060-T1
LLU|FUN_021061-T1
LLU|FUN_021062-T1
LLU|FUN_021063-T1MORN REPEAT-CONTAINING PROTEIN 4
LLU|FUN_021064-T1TRANSCRIPTION FACTOR MLR1/2
LLU|FUN_021065-T1GROWTH INHIBITION AND DIFFERENTIATION RELATED PROTEIN 88
LLU|FUN_021066-T1SAM DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_021067-T1CONDENSIN COMPLEX SUBUNIT 2
LLU|FUN_021068-T1
LLU|FUN_021069-T1
LLU|FUN_021070-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_021071-T1PATCHED-RELATED
LLU|FUN_021072-T1
LLU|FUN_021073-T1ATILLA, ISOFORM B-RELATED-RELATED
LLU|FUN_021074-T1ATILLA, ISOFORM B-RELATED-RELATED
LLU|FUN_021075-T160 KDA RIBONUCLEOPROTEIN SSA/RO
LLU|FUN_021076-T1NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12
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