About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_42650-3.7
Bpl_scaf_42650-4.14
Bpl_scaf_42650-4.162-HACID_DH_C DOMAIN-CONTAINING PROTEIN
Bpl_scaf_42650-4.2SORTING NEXIN
Bpl_scaf_42650-4.20
Bpl_scaf_42650-4.44
Bpl_scaf_42650-4.46ADENOSINE DEAMINASE
Bpl_scaf_42650-4.7
Bpl_scaf_42651-0.2
Bpl_scaf_42660-0.5NECTIN-RELATED
Bpl_scaf_42684-0.3
Bpl_scaf_42684-0.4
Bpl_scaf_4270-0.0
Bpl_scaf_4270-0.4TRANSFORMING GROWTH FACTOR ALPHA
Bpl_scaf_4270-1.6WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED
Bpl_scaf_4270-1.7PRE-MRNA-SPLICING FACTOR RBM22
Bpl_scaf_4270-1.8AT29763P-RELATED
Bpl_scaf_4270-3.5NUCLEAR HORMONE RECEPTOR
Bpl_scaf_42702-0.0P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE
Bpl_scaf_42702-0.6
Bpl_scaf_42709-0.11TRANS-SULFURATION ENZYME FAMILY MEMBER
Bpl_scaf_42709-0.17VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Bpl_scaf_42709-0.9SERINE/THREONINE-PROTEIN KINASE RIO1
Bpl_scaf_42709-1.3
Bpl_scaf_42709-3.3
Bpl_scaf_42709-4.13WD40 REPEAT PROTEIN
Bpl_scaf_42709-4.14ACTIN
Bpl_scaf_42709-4.15TESTIS-SPECIFIC PROTEIN PBS13 T-COMPLEX 11
Bpl_scaf_42709-4.25
Bpl_scaf_42709-4.27SAP18
Bpl_scaf_42730-0.2
Bpl_scaf_42730-0.4DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
Bpl_scaf_42739-0.8IONOTROPIC GLUTAMATE RECEPTOR
Bpl_scaf_42739-0.9IONOTROPIC GLUTAMATE RECEPTOR
Bpl_scaf_42749-0.0
Bpl_scaf_42749-0.5
Bpl_scaf_42749-0.9
Bpl_scaf_42755-0.12CEREBELLIN-RELATED
Bpl_scaf_42755-0.24CEREBELLIN-RELATED
Bpl_scaf_42755-0.25
Bpl_scaf_42755-0.8CEREBELLIN-RELATED
Bpl_scaf_42755-0.9CEREBELLIN-RELATED
Bpl_scaf_42771-0.4LEUCINE RICH REPEAT FAMILY PROTEIN
Bpl_scaf_4278-0.1
Bpl_scaf_42785-0.10
Bpl_scaf_42785-0.3
Bpl_scaf_42785-0.6FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_42785-0.9
Bpl_scaf_42798-0.18PROTEIN AD-016-RELATED
Bpl_scaf_42798-0.8TRANSPORTIN 3 AND IMPORTIN 13
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