About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_4150-3.30
Bpl_scaf_4150-3.32ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
Bpl_scaf_4150-3.33ARYLACETAMIDE DEACETYLASE
Bpl_scaf_4150-3.34TRIACYLGLYCEROL LIPASE
Bpl_scaf_4150-3.9
Bpl_scaf_4150-5.6CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_4150-5.9IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_4150-7.4NAD(P)H-HYDRATE EPIMERASE
Bpl_scaf_4150-8.10WD REPEAT-CONTAINING PROTEIN 61
Bpl_scaf_4150-8.11TETRATRICOPEPTIDE REPEAT PROTEIN 23
Bpl_scaf_4150-9.2
Bpl_scaf_4150-9.8RUN AND SH3 DOMAIN CONTAINING
Bpl_scaf_41503-0.11
Bpl_scaf_41503-0.18
Bpl_scaf_41503-0.19
Bpl_scaf_41503-0.6
Bpl_scaf_41503-1.3
Bpl_scaf_41503-2.2BONUS, ISOFORM C-RELATED
Bpl_scaf_41503-2.4PROTEIN LIAT1
Bpl_scaf_41503-2.8EXONUCLEASE V
Bpl_scaf_41503-3.0-
Bpl_scaf_41503-3.4DUF3504 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_41503-4.17
Bpl_scaf_41503-4.28SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Bpl_scaf_41503-4.3SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Bpl_scaf_41503-4.6SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Bpl_scaf_41503-5.360S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER
Bpl_scaf_41503-5.4CEREBELLIN-RELATED
Bpl_scaf_41503-5.5
Bpl_scaf_41503-5.6MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_41503-6.2
Bpl_scaf_41503-6.7UNCHARACTERIZED
Bpl_scaf_41513-0.0
Bpl_scaf_41513-0.17NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_41513-0.19ATP-DEPENDENT DNA HELICASE
Bpl_scaf_41513-0.25
Bpl_scaf_41523-0.1
Bpl_scaf_41523-0.14
Bpl_scaf_41529-0.26
Bpl_scaf_41529-0.27POLYCYSTIN FAMILY MEMBER
Bpl_scaf_41529-0.28
Bpl_scaf_41529-0.29POLYCYSTIN-1
Bpl_scaf_41537-0.3
Bpl_scaf_41537-0.5EXPRESSED PROTEIN
Bpl_scaf_41537-0.9E3 UBIQUITIN-PROTEIN LIGASE KCMF1
Bpl_scaf_41538-0.5
Bpl_scaf_41538-0.6GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
Bpl_scaf_41538-1.2BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_41538-2.11OSJNBA0004B13.7 PROTEIN
Bpl_scaf_41538-2.25GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
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