About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_41576-2.6CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2
Bpl_scaf_41576-2.9ATAXIN 1
Bpl_scaf_41576-4.15CYSTEINE AND HISTIDINE-RICH PROTEIN 1
Bpl_scaf_41576-4.6
Bpl_scaf_41576-4.9TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT
Bpl_scaf_41576-5.0
Bpl_scaf_41576-6.3HISTONE DEACETYLASE HDAC1-RELATED
Bpl_scaf_41577-0.18
Bpl_scaf_41577-0.19
Bpl_scaf_41578-0.6
Bpl_scaf_41578-0.7COILED-COIL DOMAIN-CONTAINING PROTEIN 154
Bpl_scaf_41578-1.10G BETA-LIKE PROTEIN GBL
Bpl_scaf_41578-1.11NITRATE, FORMATE, IRON DEHYDROGENASE
Bpl_scaf_41578-1.12GLUTAMATE-RICH WD REPEAT-CONTAINING PROTEIN 1
Bpl_scaf_41578-1.13
Bpl_scaf_41578-1.23
Bpl_scaf_41578-2.4
Bpl_scaf_41578-2.5FATTY ACID SYNTHASE
Bpl_scaf_41578-2.6FATTY ACID SYNTHASE
Bpl_scaf_41578-3.4FATTY ACID SYNTHASE
Bpl_scaf_41578-3.6FATTY ACID SYNTHASE
Bpl_scaf_41578-3.8BRAIN PROTEIN I3
Bpl_scaf_41578-4.4
Bpl_scaf_41578-5.10
Bpl_scaf_41578-5.11CEREBELLIN-RELATED
Bpl_scaf_41578-5.14
Bpl_scaf_41578-5.4
Bpl_scaf_41578-5.6MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_41578-6.0
Bpl_scaf_41578-7.13TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Bpl_scaf_416-0.5
Bpl_scaf_416-0.6
Bpl_scaf_41600-0.2PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Bpl_scaf_41600-0.4RNA-BINDING PROTEIN RELATED
Bpl_scaf_41600-1.11EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I
Bpl_scaf_41600-1.13HELIX LOOP HELIX PROTEIN 21-RELATED
Bpl_scaf_41600-1.20HELIX LOOP HELIX PROTEIN 21-RELATED
Bpl_scaf_41600-1.6
Bpl_scaf_41612-0.13RETROVIRAL-LIKE ASPARTIC PROTEASE 1
Bpl_scaf_41612-0.17
Bpl_scaf_41612-0.3
Bpl_scaf_41612-1.12CRANIOFACIAL DEVELOPMENT PROTEIN 1
Bpl_scaf_41612-1.13
Bpl_scaf_41612-1.14
Bpl_scaf_41612-1.15
Bpl_scaf_41627-0.0
Bpl_scaf_41627-0.1
Bpl_scaf_41627-0.2
Bpl_scaf_41627-1.14BONUS, ISOFORM C-RELATED
Bpl_scaf_41627-1.15CEREBELLIN-RELATED
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