About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_41436-2.6
Bpl_scaf_41436-3.11
Bpl_scaf_41436-3.12
Bpl_scaf_41436-3.2
Bpl_scaf_41436-3.6PLASMINOGEN-RELATED
Bpl_scaf_41436-4.1
Bpl_scaf_41436-4.3
Bpl_scaf_41436-4.4
Bpl_scaf_41436-4.5
Bpl_scaf_41436-4.6
Bpl_scaf_41436-5.16
Bpl_scaf_41436-5.20
Bpl_scaf_41436-5.21
Bpl_scaf_41436-5.22TYROSINASE FAMILY MEMBER
Bpl_scaf_41436-5.28
Bpl_scaf_41450-0.15MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION, SUBUNIT 18
Bpl_scaf_41450-0.16PROTEIN CBG12474
Bpl_scaf_41450-0.22TARSH-RELATED FIBRONECTIN DOMAIN-CONTAINING
Bpl_scaf_41450-0.25PROTEIN CBG12474
Bpl_scaf_41459-0.11DEATH DOMAIN-CONTAINING PROTEIN
Bpl_scaf_41459-0.12
Bpl_scaf_41459-0.4
Bpl_scaf_41465-0.4
Bpl_scaf_41465-0.5PDZ AND LIM DOMAIN PROTEIN ZASP
Bpl_scaf_41476-0.10EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Bpl_scaf_41476-0.5
Bpl_scaf_41476-0.7
Bpl_scaf_41476-0.8AGAP005574-PA
Bpl_scaf_4148-0.2
Bpl_scaf_4148-1.5
Bpl_scaf_4148-1.7
Bpl_scaf_41487-0.10
Bpl_scaf_41487-0.14
Bpl_scaf_41487-0.22
Bpl_scaf_41487-0.23
Bpl_scaf_41487-0.24NG37
Bpl_scaf_41492-0.253'-5' EXONUCLEASE ERI1-RELATED
Bpl_scaf_41492-0.26POLY A POLYMERASE CID PAP -RELATED
Bpl_scaf_41492-0.28ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_41492-0.52ACTIN
Bpl_scaf_41492-0.54LYSOSOMAL-ASSOCIATED TRANSMEMBRANE PROTEIN
Bpl_scaf_41492-0.6
Bpl_scaf_4150-1.0
Bpl_scaf_4150-10.13BTB DOMAIN-CONTAINING PROTEIN
Bpl_scaf_4150-10.6ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY
Bpl_scaf_4150-10.7CYSTEINE DIOXYGENASE
Bpl_scaf_4150-2.15
Bpl_scaf_4150-2.8OS06G0237300 PROTEIN
Bpl_scaf_4150-2.9HILLARIN
Bpl_scaf_4150-3.17HILLARIN
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