About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_4116-1.7ANAPHASE-PROMOTING COMPLEX SUBUNIT 2
Bpl_scaf_4116-2.0DOPAMINE BETA HYDROXYLASE RELATED
Bpl_scaf_4116-2.6
Bpl_scaf_4116-5.8AP COMPLEX SUBUNIT MU
Bpl_scaf_4116-6.11CYTOSOLIC PHOSPHOLIPASE A2
Bpl_scaf_4116-6.9PROSTAGLANDIN G/H SYNTHASE
Bpl_scaf_4116-7.5HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
Bpl_scaf_4116-8.14
Bpl_scaf_4116-8.6SI:CH73-390P7.2
Bpl_scaf_4116-8.7PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE
Bpl_scaf_4116-8.9DELTEX-RELATED
Bpl_scaf_4117-0.2
Bpl_scaf_41172-0.1POTASSIUM CHANNEL, SUBFAMILY K
Bpl_scaf_41172-1.1BONUS, ISOFORM C-RELATED
Bpl_scaf_41172-1.11
Bpl_scaf_41172-1.9UBIQUITIN-PROTEIN LIGASE E3C
Bpl_scaf_41172-10.13RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Bpl_scaf_41172-10.6DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
Bpl_scaf_41172-11.3
Bpl_scaf_41172-12.3LEUCOKININ RECEPTOR-RELATED
Bpl_scaf_41172-12.4LEUCOKININ RECEPTOR-RELATED
Bpl_scaf_41172-2.8MALARIA ANTIGEN-RELATED
Bpl_scaf_41172-2.9METHYLTRANSFERASE
Bpl_scaf_41172-3.0FACIOGENITAL DYSPLASIA PROTEIN
Bpl_scaf_41172-3.3HUNTINGTIN INTERACTING PROTEIN 1
Bpl_scaf_41172-3.4
Bpl_scaf_41172-4.4
Bpl_scaf_41172-4.5
Bpl_scaf_41172-5.5TETRATRICOPEPTIDE REPEAT PROTEIN 24
Bpl_scaf_41172-6.4HILLARIN
Bpl_scaf_41172-7.5LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN
Bpl_scaf_41182-0.2ATP-BINDING CASSETTE SUB-FAMILY B
Bpl_scaf_41182-1.12
Bpl_scaf_41182-1.13
Bpl_scaf_41182-1.5
Bpl_scaf_41182-2.6
Bpl_scaf_41182-2.8
Bpl_scaf_41182-3.1CYSTATIN FAMILY MEMBER
Bpl_scaf_41182-3.14LP04239P
Bpl_scaf_41182-3.15
Bpl_scaf_41182-3.16CYSTATIN FAMILY MEMBER
Bpl_scaf_41182-4.1
Bpl_scaf_41182-4.3MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_41182-4.9CYSTATIN FAMILY MEMBER
Bpl_scaf_41190-0.0
Bpl_scaf_41228-0.13
Bpl_scaf_41228-0.15
Bpl_scaf_41228-0.19
Bpl_scaf_41228-0.20
Bpl_scaf_41238-0.4
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