About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_41627-1.2CEREBELLIN-RELATED
Bpl_scaf_41640-0.1
Bpl_scaf_41640-0.7
Bpl_scaf_41640-1.10
Bpl_scaf_41640-1.2
Bpl_scaf_41640-1.9
Bpl_scaf_41649-0.4MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED
Bpl_scaf_41649-0.5BETA TRANSDUCIN-RELATED PROTEIN
Bpl_scaf_41649-1.10TRANSCRIPTION FACTOR 7 FAMILY MEMBER
Bpl_scaf_41649-1.11INORGANIC PYROPHOSPHATASE
Bpl_scaf_41649-1.12NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
Bpl_scaf_41649-1.4
Bpl_scaf_41651-0.2
Bpl_scaf_41664-0.11KREV INTERACTION TRAPPED 1-RELATED
Bpl_scaf_41664-1.1
Bpl_scaf_41664-1.4TGF-BETA INDUCED APOPTOSIS PROTEIN
Bpl_scaf_41674-0.1
Bpl_scaf_41674-0.3
Bpl_scaf_41679-0.0
Bpl_scaf_41679-0.1PARANEOPLASTIC ANTIGEN
Bpl_scaf_41679-1.1
Bpl_scaf_41679-2.0
Bpl_scaf_41685-0.4
Bpl_scaf_41691-0.0
Bpl_scaf_41691-0.1
Bpl_scaf_41692-0.4LEUCOKININ RECEPTOR-RELATED
Bpl_scaf_41692-0.6
Bpl_scaf_41692-0.7G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_41692-1.11SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
Bpl_scaf_41692-1.7
Bpl_scaf_41692-2.1
Bpl_scaf_41692-2.5PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_41703-0.6RP42 RELATED
Bpl_scaf_41703-1.16AGAP001331-PA-RELATED
Bpl_scaf_41703-1.17JITTERBUG, ISOFORM N
Bpl_scaf_41703-1.18SH2-SH3 ADAPTOR PROTEIN-RELATED
Bpl_scaf_41703-1.6JITTERBUG, ISOFORM N
Bpl_scaf_41703-2.11DEAD/H BOX POLYPEPTIDE 26/DICE1-RELATED
Bpl_scaf_41703-2.16UNCHARACTERIZED
Bpl_scaf_41703-2.17RIBONUCLEASE P PROTEIN SUBUNIT P38
Bpl_scaf_41703-2.19RIBONUCLEASE H2 SUBUNIT B
Bpl_scaf_41703-2.3ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5
Bpl_scaf_41705-0.0
Bpl_scaf_41709-0.1
Bpl_scaf_41709-0.3CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_41711-0.0VITELLINE MEMBRANE OUTER LAYER PROTEIN I-RELATED
Bpl_scaf_41712-0.0
Bpl_scaf_41714-0.0
Bpl_scaf_41714-1.0NATRIURETIC PEPTIDE RECEPTOR 3-RELATED
Bpl_scaf_41714-2.0NATRIURETIC PEPTIDE RECEPTOR 3-RELATED
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