About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_41893-2.19PROTEIN EVA-1
Bpl_scaf_41893-2.20PROTEIN EVA-1
Bpl_scaf_41893-3.1UNC-93 RELATED
Bpl_scaf_41893-3.3UNC-93 RELATED
Bpl_scaf_41894-0.6MOLTING PROTEIN MLT-4
Bpl_scaf_41908-0.2
Bpl_scaf_41928-0.4HRAS-LIKE SUPPRESSOR - RELATED
Bpl_scaf_41929-0.1BONUS, ISOFORM C-RELATED
Bpl_scaf_41929-1.3BONUS, ISOFORM C-RELATED
Bpl_scaf_41929-2.6UNCHARACTERIZED
Bpl_scaf_41929-3.1PARANEOPLASTIC ANTIGEN
Bpl_scaf_41929-3.23ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_41929-4.37NEPHRIN
Bpl_scaf_41929-4.39
Bpl_scaf_41929-4.40
Bpl_scaf_41929-4.41CONTACTIN 5
Bpl_scaf_41929-4.42
Bpl_scaf_41931-0.1ANKYRIN REPEAT-CONTAINING
Bpl_scaf_41962-0.3
Bpl_scaf_41963-1.11HOMEOBOX PROTEIN ARISTALESS
Bpl_scaf_41963-1.12N-ACETYLGALACTOSAMINYLTRANSFERASE
Bpl_scaf_41963-1.30ER MEMBRANE PROTEIN COMPLEX SUBUNIT 4
Bpl_scaf_41963-4.9
Bpl_scaf_41973-0.0
Bpl_scaf_41973-0.1
Bpl_scaf_41973-0.10
Bpl_scaf_41973-0.6
Bpl_scaf_41973-0.7PROPERDIN
Bpl_scaf_41990-0.10NEPHRIN
Bpl_scaf_41999-0.10WU:FJ29H11
Bpl_scaf_42-0.2AGAP001331-PA-RELATED
Bpl_scaf_42015-0.13CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED
Bpl_scaf_42015-0.6MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
Bpl_scaf_42029-0.1
Bpl_scaf_42029-0.2
Bpl_scaf_42036-0.1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Bpl_scaf_42047-0.0
Bpl_scaf_42063-0.10SOLUTE CARRIER FAMILY 22 MEMBER
Bpl_scaf_42063-0.16SOLUTE CARRIER FAMILY 22 MEMBER
Bpl_scaf_42063-0.9SOLUTE CARRIER FAMILY 22 MEMBER
Bpl_scaf_42063-1.2POTASSIUM CHANNEL, SUBFAMILY K
Bpl_scaf_42063-2.7MULTICOPPER OXIDASE-RELATED
Bpl_scaf_42063-2.8
Bpl_scaf_42063-3.12UNCHARACTERIZED
Bpl_scaf_42063-3.7DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
Bpl_scaf_42063-3.9COILED-COIL DOMAIN-CONTAINING PROTEIN 87
Bpl_scaf_42063-4.5DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
Bpl_scaf_42063-5.7MUCIN-22
Bpl_scaf_42063-5.9MUCIN-22
Bpl_scaf_42080-0.12
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