The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS16251 | HYPOXIA-INDUCBILE GENE 1 HIG1 -RELATED |
HS16252 | MASK PROTEIN |
HS16253 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED |
HS16254 | RUN AND FYVE DOMAIN-CONTAINING PROTEIN 2-LIKE PROTEIN |
HS16255 | TRANSFORMING GROWTH FACTOR ALPHA |
HS16256 | CARDIAC-ENRICHED FHL2-INTERACTING PROTEIN-RELATED |
HS16257 | MACROPHAGE ERYTHROBLAST ATTACHER-RELATED |
HS16258 | |
HS16259 | NEDD4-BINDING PROTEIN 3 |
HS16260 | PLATELET-DERIVED GROWTH FACTOR RECEPTOR LIKE |
HS16261 | INNER MEMBRANE TRANSPORTER YGJI-RELATED |
HS16262 | ANNEXIN |
HS16263 | TNFAIP3-INTERACTING PROTEIN COILED COIL FAMILY MEMBER |
HS16264 | GLUTATHIONE PEROXIDASE |
HS16265 | |
HS16266 | DYNACTIN P62 SUBUNIT |
HS16267 | |
HS16268 | PUTATIVE-RELATED |
HS16269 | |
HS16270 | TETRASPANIN |
HS16271 | PROTEIN CBG11839-RELATED |
HS16272 | ALPHA CATENIN |
HS16273 | AGAP008170-PA |
HS16274 | |
HS16275 | SYNUCLEIN |
HS16276 | |
HS16277 | |
HS16278 | CADHERIN-23 |
HS16279 | GH10160P |
HS16280 | FAS-ASSOCIATED PROTEIN |
HS16281 | - |
HS16282 | CAMK FAMILY PROTEIN KINASE |
HS16283 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
HS16284 | HOMEOBOX PROTEIN MSX |
HS16285 | CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB |
HS16286 | |
HS16287 | STANNIOCALCIN |
HS16288 | HOMEOBOX PROTEIN NKX |
HS16289 | BNIP1-RELATED |
HS16290 | VACUOLAR ATP SYNTHASE SUBUNIT H |
HS16291 | 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER |
HS16292 | PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B |
HS16293 | LEUCOKININ RECEPTOR-RELATED |
HS16294 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
HS16295 | UNCHARACTERIZED |
HS16296 | U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM11 |
HS16297 | EPSIN/ENT-RELATED |
HS16298 | TRANSCRIPTION FACTOR COE FAMILY MEMBER |
HS16299 | |
HS16300 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |