The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS16201 | CGI-141-RELATED/LIPASE CONTAINING PROTEIN |
HS16202 | PHOSPHOINOSITOL 3-PHOSPHATE-BINDING PROTEIN |
HS16203 | UNCHARACTERIZED |
HS16204 | PAXILLIN-RELATED |
HS16205 | UNCHARACTERIZED |
HS16206 | DNAJ HOMOLOG SUBFAMILY C MEMBER 11 |
HS16207 | |
HS16208 | RAB GTPASE-BINDING EFFECTOR PROTEIN |
HS16209 | |
HS16210 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37 |
HS16211 | CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT |
HS16212 | FI01459P |
HS16213 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
HS16214 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
HS16215 | |
HS16216 | DUF614 FAMILY PROTEIN-RELATED |
HS16217 | HISTONE H3 |
HS16218 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
HS16219 | SAP30 |
HS16220 | |
HS16221 | IONOTROPIC GLUTAMATE RECEPTOR |
HS16222 | PROTEIN EIGER |
HS16223 | |
HS16224 | RING FINGER PROTEIN 17 |
HS16225 | CONNEXIN |
HS16226 | CONNEXIN |
HS16227 | VACUOLAR ATPASE ASSEMBLY INTEGRAL MEMBRANE PROTEIN VMA21 |
HS16228 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
HS16229 | ZNF185 |
HS16230 | ZNF185 |
HS16231 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
HS16232 | RAB FAMILY |
HS16233 | - |
HS16234 | MYELIN PROTEOLIPID |
HS16235 | CADHERIN-87A |
HS16236 | NEUROLIGIN |
HS16237 | DUAL SPECIFICITY PROTEIN PHOSPHATASE |
HS16238 | ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN |
HS16239 | |
HS16240 | TYROSINE-PROTEIN KINASE RECEPTOR |
HS16241 | MSF1/PX19 RELATED |
HS16242 | |
HS16243 | AGAP004327-PA |
HS16244 | ATP-DEPENDENT RNA HELICASE DBP3 |
HS16245 | |
HS16246 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
HS16247 | NETRIN RECEPTOR UNC5 |
HS16248 | PROTEIN CBG11839-RELATED |
HS16249 | PDZ AND LIM DOMAIN PROTEIN ZASP |
HS16250 | CLATHRIN LIGHT CHAIN |