About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_015920-T1TETRASPANIN
LLU|FUN_015921-T1
LLU|FUN_015922-T1UNCHARACTERIZED
LLU|FUN_015923-T1SOLUTE CARRIER FAMILY 17
LLU|FUN_015924-T1ALZHEIMER'S DISEASE BETA-AMYLOID RELATED
LLU|FUN_015925-T1CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKE
LLU|FUN_015926-T1
LLU|FUN_015927-T1WD-REPEAT PROTEIN BING4
LLU|FUN_015928-T1STABILIZER OF AXONEMAL MICROTUBULES 2
LLU|FUN_015929-T1STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
LLU|FUN_015930-T1ATP-DEPENDENT RNA HELICASE RHLE-RELATED
LLU|FUN_015931-T1
LLU|FUN_015932-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_015933-T1
LLU|FUN_015934-T1
LLU|FUN_015935-T1MYOSIN HEAVY CHAIN, NON-MUSCLE
LLU|FUN_015936-T1
LLU|FUN_015937-T1
LLU|FUN_015938-T1
LLU|FUN_015939-T1BCL2 INTERACTING MEDIATOR OF CELL DEATH
LLU|FUN_015940-T1WW DOMAIN BINDING PROTEIN 2, ISOFORM E
LLU|FUN_015941-T1UBIQUITIN-PROTEIN LIGASE E3C
LLU|FUN_015942-T1
LLU|FUN_015943-T1CYTOKINE RECEPTOR
LLU|FUN_015944-T1SER/THR-RICH PROTEIN T10 IN DGCR REGION
LLU|FUN_015945-T1
LLU|FUN_015946-T1SERINE PROTEASE INHIBITOR, SERPIN
LLU|FUN_015947-T1XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER
LLU|FUN_015948-T1
LLU|FUN_015949-T1
LLU|FUN_015950-T1
LLU|FUN_015951-T1
LLU|FUN_015952-T1
LLU|FUN_015953-T1
LLU|FUN_015954-T1
LLU|FUN_015955-T1RGD1565685 PROTEIN
LLU|FUN_015956-T1
LLU|FUN_015957-T1
LLU|FUN_015958-T1
LLU|FUN_015959-T1
LLU|FUN_015960-T1
LLU|FUN_015961-T1GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
LLU|FUN_015962-T1T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
LLU|FUN_015963-T1
LLU|FUN_015964-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_015965-T1UNCHARACTERIZED
LLU|FUN_015966-T1
LLU|FUN_015967-T1
LLU|FUN_015968-T1
LLU|FUN_015969-T1
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