About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_38570-2.6
Bpl_scaf_38570-5.3
Bpl_scaf_38570-5.5
Bpl_scaf_38577-0.0
Bpl_scaf_38577-0.10CEREBELLIN-RELATED
Bpl_scaf_38577-0.12CEREBELLIN-RELATED
Bpl_scaf_38577-0.13
Bpl_scaf_38577-0.20CEREBELLIN-RELATED
Bpl_scaf_38577-0.4CEREBELLIN-RELATED
Bpl_scaf_38598-0.3-
Bpl_scaf_38598-0.4RAS-RELATED PROTEIN RAB
Bpl_scaf_38606-0.5
Bpl_scaf_38615-0.1
Bpl_scaf_38615-0.15SI:CH211-108C17.2-RELATED-RELATED
Bpl_scaf_38615-0.16
Bpl_scaf_38615-0.24
Bpl_scaf_38615-0.4
Bpl_scaf_38615-0.9ZGC:195170
Bpl_scaf_38626-0.0
Bpl_scaf_38645-0.5SUCCINATE--HYDROXYMETHYLGLUTARATE COA-TRANSFERASE
Bpl_scaf_38653-0.0
Bpl_scaf_38653-0.4
Bpl_scaf_38653-0.5
Bpl_scaf_38653-0.9CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Bpl_scaf_38668-0.7DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
Bpl_scaf_3868-0.5
Bpl_scaf_3868-0.8
Bpl_scaf_38683-0.16
Bpl_scaf_38683-0.18TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Bpl_scaf_38683-0.19TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Bpl_scaf_38683-0.23
Bpl_scaf_38687-0.0TETRATRICOPEPTIDE REPEAT PROTEIN 16
Bpl_scaf_38687-0.8FIBRINOGEN ALPHA CHAIN
Bpl_scaf_38698-0.1
Bpl_scaf_38703-0.11SOLUTE CARRIER FAMILY 22 MEMBER 18
Bpl_scaf_38703-0.12SOLUTE CARRIER FAMILY 5
Bpl_scaf_38703-0.37ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_38703-0.4
Bpl_scaf_38703-1.5
Bpl_scaf_38703-1.7RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR
Bpl_scaf_38703-1.8COILED-COIL DOMAIN-CONTAINING PROTEIN 169
Bpl_scaf_38703-10.34UNCHARACTERIZED
Bpl_scaf_38703-10.36PUTATIVE-RELATED
Bpl_scaf_38703-10.8TUBULIN
Bpl_scaf_38703-11.5PIRNA BIOGENESIS PROTEIN EXD1
Bpl_scaf_38703-11.6PHOSPHOGLYCERATE KINASE
Bpl_scaf_38703-12.10MASTERMIND-LIKE
Bpl_scaf_38703-12.9OVOCHYMASE-RELATED
Bpl_scaf_38703-13.0BONUS, ISOFORM C-RELATED
Bpl_scaf_38703-14.11ALPHA KINASE/ELONGATION FACTOR 2 KINASE
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