About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_38151-1.3RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Bpl_scaf_38151-2.14
Bpl_scaf_38151-2.16AGAP011099-PA
Bpl_scaf_38151-2.2
Bpl_scaf_38151-2.5
Bpl_scaf_3818-0.0
Bpl_scaf_3818-0.9
Bpl_scaf_38263-0.18DEOXYCYTIDYLATE DEAMINASE-RELATED
Bpl_scaf_38263-0.20DEOXYCYTIDYLATE DEAMINASE-RELATED
Bpl_scaf_38263-0.29
Bpl_scaf_38263-0.3
Bpl_scaf_38263-0.4
Bpl_scaf_38264-0.4
Bpl_scaf_38264-0.5SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION
Bpl_scaf_38265-0.5
Bpl_scaf_38265-0.6
Bpl_scaf_38266-0.1
Bpl_scaf_38266-0.3
Bpl_scaf_38266-1.1OPSIN
Bpl_scaf_38266-1.2ACROSIN-RELATED
Bpl_scaf_38266-10.1
Bpl_scaf_38266-11.1TRYPSIN-RELATED
Bpl_scaf_38266-12.23MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
Bpl_scaf_38266-12.5COLLAGEN ALPHA
Bpl_scaf_38266-13.2
Bpl_scaf_38266-13.9COLLAGEN ALPHA
Bpl_scaf_38266-14.10
Bpl_scaf_38266-14.9AGAP003710-PA
Bpl_scaf_38266-15.10
Bpl_scaf_38266-15.9SPECKLE-TYPE POZ PROTEIN
Bpl_scaf_38266-16.17PHENAZINE BIOSYNTHESIS PROTEIN
Bpl_scaf_38266-16.18SERINE/THREONINE-PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT 1-RELATED
Bpl_scaf_38266-2.2SI:CH211-189E2.2
Bpl_scaf_38266-2.5OPSIN
Bpl_scaf_38266-3.3NADH-UBIQUINONE OXIDOREDUCTASE PDSW SUBUNIT
Bpl_scaf_38266-3.3360S RIBOSOMAL PROTEIN L3-RELATED
Bpl_scaf_38266-3.34DNA-DIRECTED PRIMASE / POLYMERASE PROTEIN
Bpl_scaf_38266-4.3
Bpl_scaf_38266-4.7TRANSMEMBRANE PROTEIN 72
Bpl_scaf_38266-4.8CARBON CATABOLITE REPRESSOR PROTEIN 4
Bpl_scaf_38266-5.1654S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL
Bpl_scaf_38266-5.6LEUCINE-RICH REPEAT-CONTAINING
Bpl_scaf_38266-5.7GLUTAMATE DEHYDROGENASE
Bpl_scaf_38266-6.11GEO09659P1
Bpl_scaf_38266-6.8TETRASPANIN
Bpl_scaf_38266-8.2BONE MORPHOGENETIC PROTEIN INHIBITOR, NOGGIN
Bpl_scaf_38266-9.7GROUP XII SECRETORY PHOSPHOLIPASE A2 FAMILY MEMBER
Bpl_scaf_38268-0.5MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_38273-0.6INHIBITOR OF APOPTOSIS
Bpl_scaf_38274-0.3
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