About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_38338-10.0
Bpl_scaf_38338-10.1
Bpl_scaf_38338-10.10
Bpl_scaf_38338-10.11
Bpl_scaf_38338-10.16NUCLEAR PROTEIN 1 AND 2
Bpl_scaf_38338-10.19
Bpl_scaf_38338-11.10OROTATE PHOSPHORIBOSYLTRANSFERASE
Bpl_scaf_38338-11.11
Bpl_scaf_38338-11.23MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB
Bpl_scaf_38338-11.24DNA-DIRECTED RNA POLYMERASE II
Bpl_scaf_38338-12.14NUCLEOBINDIN
Bpl_scaf_38338-12.16ADAPTER PROTEIN CIKS
Bpl_scaf_38338-12.18
Bpl_scaf_38338-12.19COMM DOMAIN-CONTAINING PROTEIN 9
Bpl_scaf_38338-12.22
Bpl_scaf_38338-2.10MITOCHONDRIA-EATING PROTEIN-RELATED
Bpl_scaf_38338-2.7
Bpl_scaf_38338-2.9MITOCHONDRIA-EATING PROTEIN-RELATED
Bpl_scaf_38338-3.4
Bpl_scaf_38338-3.7D-DOPACHROME DECARBOXYLASE
Bpl_scaf_38338-4.16LD33804P
Bpl_scaf_38338-4.639S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL
Bpl_scaf_38338-4.9KELCH PROTEIN
Bpl_scaf_38338-5.8TETRATRICOPEPTIDE REPEAT PROTEIN 6
Bpl_scaf_38338-6.20SMAD
Bpl_scaf_38338-6.6UNCHARACTERIZED
Bpl_scaf_38338-6.7VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36
Bpl_scaf_38338-7.3
Bpl_scaf_38338-7.7FANCONI ANEMIA GROUP B PROTEIN
Bpl_scaf_38338-7.8RWD DOMAIN CONTAINING PROTEIN 2
Bpl_scaf_38338-8.3
Bpl_scaf_38338-8.4LIM DOMAIN ONLY 7
Bpl_scaf_38338-9.10
Bpl_scaf_38338-9.11D-DOPACHROME DECARBOXYLASE
Bpl_scaf_38338-9.7D-DOPACHROME DECARBOXYLASE
Bpl_scaf_3834-0.5GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
Bpl_scaf_38342-0.12CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_38351-0.19VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_38356-0.4N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
Bpl_scaf_38364-0.4
Bpl_scaf_38389-0.0FMRFAMIDE RECEPTOR-RELATED
Bpl_scaf_38390-0.3
Bpl_scaf_38390-2.19
Bpl_scaf_38390-2.20
Bpl_scaf_38390-2.21TROPONIN I
Bpl_scaf_38390-2.23OS10G0105400 PROTEIN
Bpl_scaf_38390-2.24SH3YL1 PROTEIN
Bpl_scaf_38390-2.25BTB DOMAIN-CONTAINING PROTEIN
Bpl_scaf_38390-3.11SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
Bpl_scaf_38390-3.6THIAMINE PYROPHOSPHATE ENZYMES
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