About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides05851REVERSE TRANSCRIPTASES
Paelopatides05852ZINC FINGER PROTEIN ZIC AND GLI
Paelopatides05854L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides05855ALCOHOL DEHYDROGENASE
Paelopatides05856STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
Paelopatides05857RGD1561648
Paelopatides05858RGD1561648
Paelopatides05859-
Paelopatides05860RGD1561648
Paelopatides05861MIR DOMAIN-CONTAINING PROTEIN
Paelopatides05862CYTOCHROME B561-RELATED
Paelopatides05863TUMOR NECROSIS FACTOR RECEPTOR TYPE 1-ASSOCIATED DEATH DOMAIN PROTEIN
Paelopatides05864-
Paelopatides05865EPM2A-INTERACTING PROTEIN 1
Paelopatides05866-
Paelopatides05867-
Paelopatides05868-
Paelopatides05869-
Paelopatides05870REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides05871-
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