About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_014852-T1
OS493_014853-T1ARABINOSE-BINDING PROTEIN-RELATED
OS493_014854-T1SEMINAL PLASMA PROTEIN
OS493_014855-T1SEMINAL PLASMA PROTEIN
OS493_014856-T1SEMINAL PLASMA PROTEIN
OS493_014857-T1SEMINAL PLASMA PROTEIN
OS493_014858-T1
OS493_014859-T1FTP DOMAIN-CONTAINING PROTEIN
OS493_014860-T1
OS493_014861-T1
OS493_014862-T1OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
OS493_014863-T1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13B
OS493_014864-T1
OS493_014865-T1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13B
OS493_014866-T1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13B
OS493_014867-T1NITRILASE-RELATED
OS493_014868-T1NITRILASE-RELATED
OS493_014869-T1
OS493_014870-T1CENTROSOME-ASSOCIATED PROTEIN 350
OS493_014871-T1CENTROSOME-ASSOCIATED PROTEIN 350
OS493_014872-T1LD33695P
OS493_014873-T1LD33695P
OS493_014874-T1TRANSMEMBRANE PROTEIN 237
OS493_014875-T1PROKARYOTIC DNA TOPOISOMERASE
OS493_014876-T1PROKARYOTIC DNA TOPOISOMERASE
OS493_014877-T1DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE
OS493_014878-T1
OS493_014879-T1
OS493_014880-T1
OS493_014881-T1
OS493_014882-T1
OS493_014883-T1MAKORIN-RELATED
OS493_014884-T1ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4
OS493_014885-T1
OS493_014886-T1SURFEIT LOCUS PROTEIN
OS493_014887-T1PREFOLDIN SUBUNIT 6
OS493_014888-T1T-BOX PROTEIN-RELATED
OS493_014889-T11700018F24RIK PROTEIN-RELATED-RELATED
OS493_014890-T1GUANINE NUCLEOTIDE EXCHANGE FACTOR
OS493_014891-T1
OS493_014892-T1
OS493_014893-T1MCG48959-RELATED
OS493_014894-T1MCG48959-RELATED
OS493_014895-T1COLLAGEN ALPHA
OS493_014896-T1EG:EG0003.4 PROTEIN-RELATED
OS493_014897-T1EG:EG0003.4 PROTEIN-RELATED
OS493_014898-T1EG:EG0003.4 PROTEIN-RELATED
OS493_014899-T1
OS493_014900-T1PROPERDIN
OS493_014901-T1MACROGLOBULIN / COMPLEMENT
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