The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000509l.16 | METAL-SULFUR CLUSTER BIOSYNTHESIS PROTEINS YUAD-RELATED |
PMEG.utg000509l.17 | ATP SYNTHASE GAMMA-RELATED |
PMEG.utg000509l.18 | PKA ANCHORING PROTEIN |
PMEG.utg000509l.19 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
PMEG.utg000509l.2 | PIKACHURIN-LIKE PROTEIN |
PMEG.utg000509l.20 | HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 |
PMEG.utg000509l.21 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
PMEG.utg000509l.22 | ISTHMIN-2 |
PMEG.utg000509l.23 | RIBOSOMAL PROTEIN S6 KINASE |
PMEG.utg000509l.24 | AP COMPLEX SUBUNIT MU |
PMEG.utg000509l.25 | |
PMEG.utg000509l.26 | GDP-D-GLUCOSE PHOSPHORYLASE 1 |
PMEG.utg000509l.27 | BRISC AND BRCA1-A COMPLEX MEMBER 2 |
PMEG.utg000509l.28 | DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 |
PMEG.utg000509l.29 | PORPHOBILINOGEN DEAMINASE |
PMEG.utg000509l.3 | COLLAGEN ALPHA |
PMEG.utg000509l.30 | RAB FAMILY |
PMEG.utg000509l.31 | O-METHYLTRANSFERASE-RELATED |
PMEG.utg000509l.32 | O-METHYLTRANSFERASE-RELATED |
PMEG.utg000509l.33 | PROTEIN BARK BEETLE |
PMEG.utg000509l.34 | PROTEIN BARK BEETLE |
PMEG.utg000509l.35 | INTERFERON ALPHA-INDUCIBLE PROTEIN 27 |
PMEG.utg000509l.36 | NINEIN |
PMEG.utg000509l.37 | TNF RECEPTOR ASSOCIATED FACTOR |
PMEG.utg000509l.38 | AAA-FAMILY ATPASE |
PMEG.utg000509l.39 | |
PMEG.utg000509l.4 | COLLAGEN ALPHA |
PMEG.utg000509l.40 | |
PMEG.utg000509l.41 | POTE ANKYRIN DOMAIN |
PMEG.utg000509l.42 | UPF0764 PROTEIN C16ORF89 |
PMEG.utg000509l.43 | ADP RIBOSYLATION FACTOR-RELATED |
PMEG.utg000509l.44 | ADP RIBOSYLATION FACTOR-RELATED |
PMEG.utg000509l.45 | N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE |
PMEG.utg000509l.46 | N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE |
PMEG.utg000509l.47 | PRESENILIN |
PMEG.utg000509l.48 | LP21163P |
PMEG.utg000509l.49 | UNCHARACTERIZED |
PMEG.utg000509l.5 | COLLAGEN ALPHA |
PMEG.utg000509l.50 | PHOSPHODIESTERASE HL |
PMEG.utg000509l.51 | SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR |
PMEG.utg000509l.52 | PERIAXIN/AHNAK |
PMEG.utg000509l.53 | 3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN |
PMEG.utg000509l.54 | CALMODULIN-LYSINE N-METHYLTRANSFERASE |
PMEG.utg000509l.55 | LEUCOKININ RECEPTOR-RELATED |
PMEG.utg000509l.6 | SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1 |
PMEG.utg000509l.7 | PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE |
PMEG.utg000509l.8 | |
PMEG.utg000509l.9 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 11 |
PMEG.utg000516l.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED |
PMEG.utg000532l.1 | HEMK METHYLTRANSFERASE |