The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000543l.30 | OXYSTEROL-BINDING PROTEIN-RELATED |
| PMEG.utg000543l.31 | B-CELL LYMPHOMA/LEUKEMIA 11 |
| PMEG.utg000543l.4 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 |
| PMEG.utg000543l.5 | INTEGRATOR COMPLEX SUBUNIT 2 |
| PMEG.utg000543l.6 | UNCHARACTERIZED |
| PMEG.utg000543l.7 | PROTEIN LIN1 |
| PMEG.utg000543l.8 | DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED |
| PMEG.utg000543l.9 | REPLICATION PROTEIN A-RELATED |
| PMEG.utg000546l.1 | CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18 |
| PMEG.utg000547l.2 | BRIDGING INTEGRATOR 3 |
| PMEG.utg000547l.3 | BRIDGING INTEGRATOR 3 |
| PMEG.utg000547l.4 | PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 |
| PMEG.utg000547l.5 | L-SERYL-TRNA(SEC) KINASE |
| PMEG.utg000547l.6 | TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B |
| PMEG.utg000547l.7 | FIBROBLAST GROWTH FACTOR RECEPTOR |
| PMEG.utg000547l.8 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| PMEG.utg000552l.1 | |
| PMEG.utg000552l.2 | COILED-COIL DOMAIN-CONTAINING PROTEIN 40 |
| PMEG.utg000552l.3 | CYCLINS |
| PMEG.utg000552l.4 | TUBULIN |
| PMEG.utg000552l.5 | TUBULIN |
| PMEG.utg000553l.1 | UNCHARACTERIZED |
| PMEG.utg000553l.2 | DNA HELICASE RECQ FAMILY MEMBER |
| PMEG.utg000558l.1 | G-PROTEIN COUPLED RECEPTOR |
| PMEG.utg000558l.2 | |
| PMEG.utg000559l.1 | DNAJ HOMOLOG SUBFAMILY C MEMBER 1 |
| PMEG.utg000559l.2 | RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT |
| PMEG.utg000559l.3 | RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT |
| PMEG.utg000559l.4 | MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER |
| PMEG.utg000559l.5 | AMINO ACID TRANSPORTER |
| PMEG.utg000559l.7 | |
| PMEG.utg000559l.8 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 24 |
| PMEG.utg000559l.9 | BETA-GALACTOSIDASE RELATED |
| PMEG.utg000562l.1 | |
| PMEG.utg000563l.1 | G-PROTEIN COUPLED RECEPTOR |
| PMEG.utg000563l.2 | CYSTEINE-RICH PROTEIN CRIP FAMILY MEMBER |
| PMEG.utg000566l.1 | RHO GTPASE-ACTIVATING PROTEIN 190 |
| PMEG.utg000567l.1 | HELIX LOOP HELIX PROTEIN 21-RELATED |
| PMEG.utg000571l.1 | LATE SECRETORY PATHWAY PROTEIN AVL9-RELATED |
| PMEG.utg000573l.1 | SKP1 |
| PMEG.utg000573l.2 | 1,4-ALPHA-GLUCAN-BRANCHING ENZYME |
| PMEG.utg000573l.3 | TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8 |
| PMEG.utg000576l.1 | COLLAGEN ALPHA |
| PMEG.utg000576l.2 | SERINE/THREONINE PROTEIN PHOSPHATASE |
| PMEG.utg000590l.1 | 2-AMINOMUCONIC SEMIALDEHYDE DEHYDROGENASE |
| PMEG.utg000597l.1 | |
| PMEG.utg000597l.10 | CHIMERIN FAMILY MEMBER |
| PMEG.utg000597l.11 | MUCIN 4-RELATED |
| PMEG.utg000597l.12 | |
| PMEG.utg000597l.2 |
