The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000597l.3 | |
| PMEG.utg000597l.4 | GATA ZINC FINGER DOMAIN-CONTAINING |
| PMEG.utg000597l.5 | SERINE HYDROXYMETHYLTRANSFERASE |
| PMEG.utg000597l.6 | CONDENSIN-2 COMPLEX SUBUNIT G2 |
| PMEG.utg000597l.7 | CONDENSIN-2 COMPLEX SUBUNIT G2 |
| PMEG.utg000597l.8 | CCAAT/ENHANCER BINDING PROTEIN |
| PMEG.utg000597l.9 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
| PMEG.utg000599l.1 | AGAP001705-PA |
| PMEG.utg000603l.1 | FTP DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000604l.1 | |
| PMEG.utg000608l.1 | |
| PMEG.utg000608l.2 | WD40 REPEAT DOMAIN 95 |
| PMEG.utg000611l.1 | PROKARYOTIC DNA TOPOISOMERASE |
| PMEG.utg000611l.2 | ZINC FINGER PROTEIN 207 |
| PMEG.utg000611l.3 | |
| PMEG.utg000611l.4 | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE |
| PMEG.utg000611l.5 | |
| PMEG.utg000611l.6 | |
| PMEG.utg000618l.1 | |
| PMEG.utg000622l.1 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| PMEG.utg000622l.2 | |
| PMEG.utg000622l.3 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| PMEG.utg000631l.1 | MRNA EXPORT FACTOR AND BUB3 |
| PMEG.utg000631l.2 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
| PMEG.utg000631l.3 | REGULATOR OF G-PROTEIN SIGNALING LOCO |
| PMEG.utg000635l.2 | |
| PMEG.utg000640l.1 | GLYCINE DEHYDROGENASE, DECARBOXYLATING |
| PMEG.utg000641l.1 | POLYCYSTIN FAMILY MEMBER |
| PMEG.utg000641l.2 | P25 ALPHA-RELATED |
| PMEG.utg000641l.3 | VITAMIN K-DEPENDENT GAMMA-CARBOXYLASE |
| PMEG.utg000645l.1 | UNCHARACTERIZED |
| PMEG.utg000648l.1 | PROTEIN PHOSPHATASE 1 INHIBITOR POTENTIATED BY PROTEIN KINASE C |
| PMEG.utg000648l.2 | ALPHA-GLUCOSIDASE |
| PMEG.utg000649l.1 | U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED |
| PMEG.utg000649l.2 | TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 |
| PMEG.utg000649l.3 | |
| PMEG.utg000651l.1 | P25 ALPHA-RELATED |
| PMEG.utg000664l.1 | SODIUM/HYDROGEN EXCHANGER |
| PMEG.utg000665l.1 | RNA-BINDING PROTEIN 8A |
| PMEG.utg000683l.1 | PROTEIN PHOSPHATASE 4 REGULATORY SUBUNIT 4 PPP4R4 |
| PMEG.utg000704l.1 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
| PMEG.utg000704l.2 | SI:CH1073-475A24.1 |
| PMEG.utg000705l.1 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
| PMEG.utg000705l.2 | TRANSMEMBRANE SUPERFAMILY 6 MEMBER 1/2 |
| PMEG.utg000705l.3 | PEROXISOMAL BIOGENESIS FACTOR 11 |
| PMEG.utg000705l.4 | |
| PMEG.utg000705l.5 | |
| PMEG.utg000758l.1 | |
| PMEG.utg000780l.1 | CGI-121 FAMILY MEMBER |
| PMEG.utg000934l.1 | THAP DOMAIN PROTEIN |
