The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000532l.2 | ENDORIBONUCLEASE LACTB2 |
| PMEG.utg000532l.3 | SERINE/THREONINE-PROTEIN KINASE TAO |
| PMEG.utg000533l.1 | PLECKSTRIN HOMOLOGY-LIKE DOMAIN, FAMILY B, MEMBER 3 |
| PMEG.utg000541l.1 | DOPAMINE BETA HYDROXYLASE RELATED |
| PMEG.utg000541l.10 | TETRASPANIN |
| PMEG.utg000541l.11 | PEPTIDYLPROLYL ISOMERASE |
| PMEG.utg000541l.12 | NUCLEAR FUSION PROTEIN FUS2 |
| PMEG.utg000541l.2 | MICROFIBRIL-ASSOCIATED PROTEIN |
| PMEG.utg000541l.3 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
| PMEG.utg000541l.4 | SUPPRESSOR OF TY 5 |
| PMEG.utg000541l.5 | |
| PMEG.utg000541l.6 | |
| PMEG.utg000541l.7 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
| PMEG.utg000541l.8 | |
| PMEG.utg000541l.9 | OTU DEUBIQUITINASE WITH LINEAR LINKAGE-SPECIFICITY A-RELATED |
| PMEG.utg000542l.10 | DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE |
| PMEG.utg000542l.11 | UNCHARACTERIZED |
| PMEG.utg000542l.12 | BETA-HEXOSAMINIDASE |
| PMEG.utg000542l.13 | BETA-HEXOSAMINIDASE |
| PMEG.utg000542l.2 | |
| PMEG.utg000542l.3 | |
| PMEG.utg000542l.4 | |
| PMEG.utg000542l.5 | VOLTAGE-GATED POTASSIUM CHANNEL |
| PMEG.utg000542l.6 | BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA |
| PMEG.utg000542l.7 | |
| PMEG.utg000542l.8 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| PMEG.utg000542l.9 | E3 UBIQUITIN-PROTEIN LIGASE RNF165 |
| PMEG.utg000543l.1 | SARM1 |
| PMEG.utg000543l.10 | SNF5 |
| PMEG.utg000543l.11 | HOMEOBOX PROTEIN SIX |
| PMEG.utg000543l.12 | |
| PMEG.utg000543l.13 | NIPSNAP-RELATED |
| PMEG.utg000543l.14 | UNCHARACTERIZED |
| PMEG.utg000543l.15 | COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED |
| PMEG.utg000543l.16 | B9 DOMAIN-CONTAINING |
| PMEG.utg000543l.17 | MCG131172, ISOFORM CRA_A |
| PMEG.utg000543l.18 | RING FINGER 10 FAMILY MEMBER |
| PMEG.utg000543l.19 | UPF0764 PROTEIN C16ORF89 |
| PMEG.utg000543l.2 | |
| PMEG.utg000543l.20 | PROTEASE M14 CARBOXYPEPTIDASE |
| PMEG.utg000543l.21 | MITOGEN-ACTIVATED PROTEIN KINASE |
| PMEG.utg000543l.22 | SERINE/THREONINE-PROTEIN KINASE TAO1-LIKE PROTEIN |
| PMEG.utg000543l.23 | MYOTUBULARIN-RELATED |
| PMEG.utg000543l.24 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| PMEG.utg000543l.25 | PBS LYASE HEAT-LIKE PROTEIN |
| PMEG.utg000543l.26 | MITOTIC-SPINDLE ORGANIZING PROTEIN 2A-RELATED |
| PMEG.utg000543l.27 | NIBRIN-RELATED |
| PMEG.utg000543l.28 | NACHT DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000543l.29 | O-ACYLTRANSFERASE |
| PMEG.utg000543l.3 | PHOSPHOENOLPYRUVATE CARBOXYLASE |
