The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000454l.4 | ALPHA-CATULIN |
| PMEG.utg000454l.5 | 40S RIBOSOMAL PROTEIN S28 |
| PMEG.utg000454l.6 | NNMT/PNMT/TEMT FAMILY MEMBER |
| PMEG.utg000454l.7 | |
| PMEG.utg000454l.8 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| PMEG.utg000454l.9 | VILLIN |
| PMEG.utg000455l.1 | VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA SUBUNIT |
| PMEG.utg000455l.2 | EPITHELIAL MEMBRANE PROTEIN-RELATED |
| PMEG.utg000455l.3 | CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN |
| PMEG.utg000455l.4 | NUCLEAR RECEPTOR COACTIVATOR 4 |
| PMEG.utg000455l.5 | |
| PMEG.utg000455l.6 | FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE |
| PMEG.utg000455l.7 | |
| PMEG.utg000455l.8 | MAMMALIAN EPENDYMIN-RELATED PROTEIN 1 |
| PMEG.utg000459l.1 | N-ACYL-PHOSPHATIDYLETHANOLAMINE-HYDROLYZING PHOSPHOLIPASE D |
| PMEG.utg000460l.1 | |
| PMEG.utg000461l.1 | GLUCOCORTICOID MODULATORY ELEMENT-BINDING PROTEIN |
| PMEG.utg000461l.10 | TRANSMEMBRANE PROTEIN 181 |
| PMEG.utg000461l.11 | ANOCTAMIN |
| PMEG.utg000461l.12 | ARRESTIN DOMAIN CONTAINING PROTEIN |
| PMEG.utg000461l.13 | COILED-COIL ALPHA-HELICAL ROD PROTEIN 1 |
| PMEG.utg000461l.14 | AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C |
| PMEG.utg000461l.15 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
| PMEG.utg000461l.16 | CELL DIVISION PROTEIN KINASE |
| PMEG.utg000461l.17 | S-ADENOSYLMETHIONINE DECARBOXYLASE |
| PMEG.utg000461l.18 | S-ADENOSYLMETHIONINE DECARBOXYLASE |
| PMEG.utg000461l.19 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| PMEG.utg000461l.2 | TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 |
| PMEG.utg000461l.20 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
| PMEG.utg000461l.21 | KRAB AND ZINC FINGER DOMAIN-CONTAINING |
| PMEG.utg000461l.23 | SH3 DOMAIN-BINDING GLUTAMIC ACID-RICH-LIKE PROTEIN |
| PMEG.utg000461l.24 | C21ORF13-RELATED |
| PMEG.utg000461l.25 | 60S RIBOSOMAL PROTEIN L24 |
| PMEG.utg000461l.26 | |
| PMEG.utg000461l.27 | ATP-DEPENDENT RNA HELICASE |
| PMEG.utg000461l.28 | ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 |
| PMEG.utg000461l.29 | AAA DOMAIN-CONTAINING |
| PMEG.utg000461l.3 | |
| PMEG.utg000461l.30 | MICROTUBULE-ASSOCIATED PROTEIN |
| PMEG.utg000461l.32 | CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE |
| PMEG.utg000461l.33 | INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE 1-BINDING PROTEIN 1 |
| PMEG.utg000461l.34 | QUINONE OXIDOREDUCTASE-LIKE PROTEIN 1 |
| PMEG.utg000461l.35 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR AT 64C, ISOFORM A |
| PMEG.utg000461l.36 | MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER |
| PMEG.utg000461l.37 | TRANSLATION ELONGATION FACTOR-RELATED |
| PMEG.utg000461l.38 | MALIC ENZYME-RELATED |
| PMEG.utg000461l.39 | CENTROSOMAL PROTEIN OF 85 KDA |
| PMEG.utg000461l.4 | |
| PMEG.utg000461l.40 | GOLGI-ASSOCIATED PDZ AND COILED-COIL MOTIF-CONTAINING |
| PMEG.utg000461l.41 |
