The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000433l.15 | TRANSMEMBRANE PROTEIN 181 |
| PMEG.utg000433l.2 | PROTEIN O-MANNOSYL-TRANSFERASE TMTC2 |
| PMEG.utg000433l.3 | PYRIDINE NUCLEOTIDE-DISULFIDE OXIDOREDUCTASE DOMAIN-CONTAINING |
| PMEG.utg000433l.4 | INSULIN-LIKE GROWTH FACTOR I |
| PMEG.utg000433l.5 | PEST PROTEOLYTIC SIGNAL-CONTAINING NUCLEAR PROTEIN |
| PMEG.utg000433l.6 | PROTEIN CBG04600 |
| PMEG.utg000433l.7 | TRANSGELIN |
| PMEG.utg000433l.8 | |
| PMEG.utg000433l.9 | TUFTELIN-INTERACTING PROTEIN 11-RELATED |
| PMEG.utg000435l.1 | HOMEOBOX PROTEIN ARISTALESS |
| PMEG.utg000437l.1 | |
| PMEG.utg000437l.2 | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN |
| PMEG.utg000438l.1 | PROTEIN DIAPHANOUS |
| PMEG.utg000438l.10 | NUCLEAR PROTEIN SKIP-RELATED |
| PMEG.utg000438l.11 | CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2 |
| PMEG.utg000438l.12 | CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2 |
| PMEG.utg000438l.13 | |
| PMEG.utg000438l.2 | UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATED |
| PMEG.utg000438l.3 | UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATED |
| PMEG.utg000438l.4 | |
| PMEG.utg000438l.5 | EPITHELIAL MEMBRANE PROTEIN-RELATED |
| PMEG.utg000438l.6 | |
| PMEG.utg000438l.7 | |
| PMEG.utg000438l.8 | CENTROMERE PROTEIN C |
| PMEG.utg000438l.9 | ABC1 FAMILY PROTEIN |
| PMEG.utg000440l.1 | SERINE/THREONINE-PROTEIN KINASE PIM |
| PMEG.utg000440l.10 | CALCIUM-DEPENDENT SECRETION ACTIVATOR |
| PMEG.utg000440l.11 | NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER |
| PMEG.utg000440l.12 | MAKORIN-RELATED |
| PMEG.utg000440l.13 | UNCHARACTERIZED |
| PMEG.utg000440l.14 | BCR-ASSOCIATED PROTEIN, BAP |
| PMEG.utg000440l.15 | |
| PMEG.utg000440l.16 | DEOXYRIBONUCLEASE |
| PMEG.utg000440l.17 | TETRASPANIN |
| PMEG.utg000440l.18 | HOMEOBOX PROTEIN ARISTALESS |
| PMEG.utg000440l.19 | MONOCARBOXYLATE TRANSPORTER |
| PMEG.utg000440l.2 | INNER NUCLEAR MEMBRANE PROTEIN MAN1 LEM DOMAIN CONTAINING PROTEIN |
| PMEG.utg000440l.20 | PROTEIN NEDD1 |
| PMEG.utg000440l.3 | DEHYDROGENASE RELATED |
| PMEG.utg000440l.4 | SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED |
| PMEG.utg000440l.5 | KINESIN-LIKE PROTEIN KLP-3 |
| PMEG.utg000440l.6 | DOWN REGULATED IN RENAL CARCINOMA 1/TU3A |
| PMEG.utg000440l.7 | |
| PMEG.utg000440l.8 | |
| PMEG.utg000440l.9 | UPSET, ISOFORM A |
| PMEG.utg000441l.1 | MORN REPEAT-CONTAINING PROTEIN 3 |
| PMEG.utg000441l.2 | CARBONIC ANHYDRASE |
| PMEG.utg000445l.1 | |
| PMEG.utg000447l.1 | WD-40 REPEAT PROTEIN |
| PMEG.utg000447l.10 | GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE |
