About Placopecten magellanicus

The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Placopecten magellanicusMolluscadeep-sea scallopHydrothermal vent0-384Dalian in the Liaoning Province of China (38.43 N 120.91 E)6577

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-1.83GbChromosome2023-Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research InstitutePRJNA92312394.10%28,111

References
TitleJournalPubmed ID
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallopsGenomics37977331

Gene Information

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Gene IDDescription
PMEG.utg000423l.11
PMEG.utg000423l.12SODIUM/CHLORIDE DEPENDENT TRANSPORTER
PMEG.utg000423l.13SODIUM/CHLORIDE DEPENDENT TRANSPORTER
PMEG.utg000423l.14PSEUDOURIDYLATE SYNTHASE
PMEG.utg000423l.15CARBONYL REDUCTASE 1-RELATED
PMEG.utg000423l.16GUANINE NUCLEOTIDE EXCHANGE FACTOR
PMEG.utg000423l.18PSEUDOURIDYLATE SYNTHASE
PMEG.utg000423l.19LITHOSTATHINE
PMEG.utg000423l.2CYSTATIN
PMEG.utg000423l.20EXS-RELATED PROTEIN
PMEG.utg000423l.3O-ACYLTRANSFERASE
PMEG.utg000423l.4
PMEG.utg000423l.5TRANSCRIPTION FACTOR 19
PMEG.utg000423l.6UNCHARACTERIZED
PMEG.utg000423l.7WNT RELATED
PMEG.utg000423l.8ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
PMEG.utg000423l.9ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
PMEG.utg000424l.1NF-KAPPA-B INHIBITOR ALPHA
PMEG.utg000426l.1HILLARIN
PMEG.utg000426l.2SUCCINYL-COA SYNTHETASE BETA CHAIN
PMEG.utg000426l.3CYCLIN-D-BINDING MYB-LIKE TRANSCRIPTION FACTOR 1
PMEG.utg000426l.4TRANSMEMBRANE PROTEIN 243
PMEG.utg000427l.1MULTICOPPER OXIDASE-RELATED
PMEG.utg000427l.10D-AMINO ACID OXIDASE
PMEG.utg000427l.11LEUCINE-RICH REPEAT-CONTAINING
PMEG.utg000427l.12COILED-COIL DOMAIN-CONTAINING PROTEIN 171
PMEG.utg000427l.2
PMEG.utg000427l.3E3 UBIQUITIN-PROTEIN LIGASE PRAJA
PMEG.utg000427l.4SH3 DOMAIN-CONTAINING
PMEG.utg000427l.5CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT A CAF-1 SUBUNIT A
PMEG.utg000427l.6SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 3
PMEG.utg000427l.7
PMEG.utg000427l.8-
PMEG.utg000427l.9TYROSINE-PROTEIN KINASE RECEPTOR
PMEG.utg000429l.1INHIBITOR OF APOPTOSIS
PMEG.utg000429l.2CARBOXYLESTERASE
PMEG.utg000429l.3
PMEG.utg000429l.4RE52028P
PMEG.utg000429l.5ATPASE N2B
PMEG.utg000429l.6CLEAVAGE STIMULATION FACTOR SUBUNIT 2
PMEG.utg000429l.7CLEAVAGE STIMULATION FACTOR SUBUNIT 2
PMEG.utg000429l.8GI:13385330
PMEG.utg000429l.9GI:13385330
PMEG.utg000432l.1WD40 REPEAT DOMAIN 95
PMEG.utg000433l.1
PMEG.utg000433l.10
PMEG.utg000433l.11
PMEG.utg000433l.12GLUTATHIONE S-TRANSFERASE
PMEG.utg000433l.13VWFA DOMAIN-CONTAINING PROTEIN
PMEG.utg000433l.14CCR4 NOT-RELATED
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