About Placopecten magellanicus

The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Placopecten magellanicusMolluscadeep-sea scallopHydrothermal vent0-384Dalian in the Liaoning Province of China (38.43 N 120.91 E)6577

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-1.83GbChromosome2023-Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research InstitutePRJNA92312394.10%28,111

References
TitleJournalPubmed ID
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallopsGenomics37977331

Gene Information

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Gene IDDescription
PMEG.utg000447l.11CLEAVAGE STIMULATION FACTOR SUBUNIT 1
PMEG.utg000447l.12TRANSMEMBRANE GTPASE FZO1
PMEG.utg000447l.13NLPC_P60 DOMAIN-CONTAINING PROTEIN
PMEG.utg000447l.14INACTIVE POLYGLYCYLASE TTLL10
PMEG.utg000447l.15TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4
PMEG.utg000447l.16OTU DOMAIN CONTAINING PROTEIN
PMEG.utg000447l.17CALCIUM BINDING PROTEIN
PMEG.utg000447l.18PROTEIN C3ORF33
PMEG.utg000447l.2PDZ AND LIM DOMAIN PROTEIN ZASP
PMEG.utg000447l.3MITOCHONDRIAL CARRIER PROTEIN RIM2
PMEG.utg000447l.4EF-HAND DOMAIN-CONTAINING PROTEIN D
PMEG.utg000447l.5DDB1- AND CUL4-ASSOCIATED FACTOR 17
PMEG.utg000447l.6NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING
PMEG.utg000447l.7GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN
PMEG.utg000447l.8CARBAMOYLTRANSFERASE FAMILY MEMBER
PMEG.utg000447l.9TMEM26 PROTEIN
PMEG.utg000449l.1LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
PMEG.utg000449l.2UNCHARACTERIZED
PMEG.utg000451l.1PRE-MRNA SPLICING FACTOR
PMEG.utg000451l.10
PMEG.utg000451l.11CYTOSINE DEAMINASE FAMILY MEMBER
PMEG.utg000451l.13INOSITOL-TETRAKISPHOSPHATE 1-KINASE
PMEG.utg000451l.14NAD P H OXIDOREDUCTASE-RELATED
PMEG.utg000451l.15RHO FAMILY GTPASE
PMEG.utg000451l.16PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1
PMEG.utg000451l.17PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1
PMEG.utg000451l.18COILED-COIL DOMAIN-CONTAINING PROTEIN 97
PMEG.utg000451l.19BTB POZ DOMAIN CONTAINING 7
PMEG.utg000451l.2CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 61
PMEG.utg000451l.20CALCIUM BINDING PROTEIN
PMEG.utg000451l.3SOLUTE CARRIER FAMILY 39
PMEG.utg000451l.4ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED
PMEG.utg000451l.5MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 29
PMEG.utg000451l.6SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
PMEG.utg000451l.7SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
PMEG.utg000451l.8
PMEG.utg000451l.9
PMEG.utg000452l.1SULFOTRANSFERASE SULT
PMEG.utg000452l.2SULFOTRANSFERASE SULT
PMEG.utg000454l.1LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
PMEG.utg000454l.10DULLARD PROTEIN PHOSPHATASE
PMEG.utg000454l.11KRUEPPEL-LIKE TRANSCRIPTION FACTOR
PMEG.utg000454l.12
PMEG.utg000454l.13THIAMIN PYROPHOSPHOKINASE
PMEG.utg000454l.14RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT
PMEG.utg000454l.15RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT
PMEG.utg000454l.16VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
PMEG.utg000454l.17CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
PMEG.utg000454l.2MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK
PMEG.utg000454l.3CELL DIVISION PROTEIN KINASE
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