The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000490l.22 | MUSCLEBLIND-LIKE PROTEIN |
| PMEG.utg000490l.3 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
| PMEG.utg000490l.4 | GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2 |
| PMEG.utg000490l.5 | UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 |
| PMEG.utg000490l.6 | ACYL-COA SYNTHETASE |
| PMEG.utg000490l.7 | CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED |
| PMEG.utg000490l.8 | |
| PMEG.utg000490l.9 | PEROXISOMAL SARCOSINE OXIDASE |
| PMEG.utg000491l.1 | AMINO ACID TRANSPORTER |
| PMEG.utg000491l.2 | TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER |
| PMEG.utg000491l.3 | EUKARYOTIC TRANSLATION INITIATION FACTOR |
| PMEG.utg000491l.4 | CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL |
| PMEG.utg000491l.5 | BETA-CATENIN-LIKE PROTEIN 1 NUCLEAR ASSOCIATED PROTEIN |
| PMEG.utg000491l.6 | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 |
| PMEG.utg000492l.1 | RAN GUANINE NUCLEOTIDE RELEASE FACTOR |
| PMEG.utg000492l.2 | CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18 |
| PMEG.utg000494l.1 | CYCLIN |
| PMEG.utg000494l.2 | NUCLEAR HORMONE RECEPTOR HR3-RELATED |
| PMEG.utg000495l.1 | REGULATOR OF CHROMOSOME CONDENSATION |
| PMEG.utg000495l.2 | AMINOMETHYLTRANSFERASE |
| PMEG.utg000495l.3 | CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P |
| PMEG.utg000495l.4 | UNCHARACTERIZED |
| PMEG.utg000495l.5 | U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 |
| PMEG.utg000495l.6 | PRE-MRNA-SPLICING FACTOR ISY1 |
| PMEG.utg000495l.7 | CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED |
| PMEG.utg000498l.1 | LD25575P |
| PMEG.utg000498l.2 | LORICRIN |
| PMEG.utg000498l.3 | TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 |
| PMEG.utg000498l.4 | ATP-BINDING CASSETTE SUB-FAMILY C |
| PMEG.utg000498l.5 | 5'-NUCLEOTIDASE DOMAIN-CONTAINING |
| PMEG.utg000498l.6 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED |
| PMEG.utg000499l.1 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| PMEG.utg000499l.2 | 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE |
| PMEG.utg000499l.3 | GLYCOSYL HYDROLASE |
| PMEG.utg000499l.4 | |
| PMEG.utg000503l.1 | VALACYCLOVIR HYDROLASE |
| PMEG.utg000504l.1 | LEUCYL-TRNA SYNTHETASE |
| PMEG.utg000504l.2 | |
| PMEG.utg000504l.3 | ATP7, ISOFORM B |
| PMEG.utg000504l.4 | SPERMATOGENESIS-ASSOCIATED 4-RELATED |
| PMEG.utg000504l.5 | HISTIDYL-TRNA SYNTHETASE |
| PMEG.utg000504l.6 | MULTI-COPPER OXIDASE |
| PMEG.utg000504l.7 | MYOSIN HEAVY CHAIN, NON-MUSCLE |
| PMEG.utg000508l.1 | PATCHED-RELATED |
| PMEG.utg000509l.1 | COILIN |
| PMEG.utg000509l.10 | ALPHA-GLUCOSIDASE |
| PMEG.utg000509l.11 | NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED |
| PMEG.utg000509l.12 | SORTING NEXIN FAMILY MEMBER |
| PMEG.utg000509l.13 | COILED-COIL DOMAIN-CONTAINING PROTEIN 175 |
| PMEG.utg000509l.14 | MOLYBDOPTERIN COFACTOR SULFURASE MOSC |
