About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides55668-
Paelopatides55669-
Paelopatides55670-
Paelopatides55671SOLUTE CARRIER FAMILY 35
Paelopatides55672ALANINE--GLYOXYLATE AMINOTRANSFERASE 2, MITOCHONDRIAL
Paelopatides55673TETRATRICOPEPTIDE REPEAT PROTEIN 4
Paelopatides55674NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides55675-
Paelopatides55676-
Paelopatides55677PROTEIN CBG26694
Paelopatides55678-
Paelopatides55679ENOLASE
Paelopatides55680ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 53
Paelopatides55681TEX261 PROTEIN
Paelopatides55682DOCKING PROTEIN RELATED
Paelopatides55683-
Paelopatides55684SOLUTE CARRIER FAMILY 25
Paelopatides55685EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED
Paelopatides55686SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE
Paelopatides55687ORGANIC SOLUTE TRANSPORTER-RELATED
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