About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides55645SI:CH211-108C17.2-RELATED-RELATED
Paelopatides55646CRUMBS FAMILY MEMBER
Paelopatides55647-
Paelopatides55648FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides55649PROTEIN CBG26694
Paelopatides55650LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Paelopatides55651ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides55652ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides55653ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides55654FAT ATYPICAL CADHERIN-RELATED
Paelopatides55655ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides55656-
Paelopatides55657PROTEIN CBG26694
Paelopatides55658-
Paelopatides55662ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides55663TYROSINE-PROTEIN KINASE
Paelopatides55664-
Paelopatides55665-
Paelopatides55666ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides55667HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3
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