About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides55623SODIUM-BILE ACID COTRANSPORTER
Paelopatides55624ARYLSULFATASE FAMILY MEMBER
Paelopatides55625FI01416P
Paelopatides55626EPM2A-INTERACTING PROTEIN 1
Paelopatides55627EPM2A-INTERACTING PROTEIN 1
Paelopatides55628SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
Paelopatides55629-
Paelopatides55630TNFAIP3-INTERACTING PROTEIN COILED COIL FAMILY MEMBER
Paelopatides55631-
Paelopatides55632SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides55633PROTEIN DIAPHANOUS
Paelopatides55634PROTEIN DIAPHANOUS
Paelopatides55635-
Paelopatides55636-
Paelopatides55637-
Paelopatides55638-
Paelopatides55640UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE 110 KDA SUBUNIT
Paelopatides55641PHOSPHOLIPASE A-2-ACTIVATING PROTEIN
Paelopatides55642PHOSPHOLIPASE A-2-ACTIVATING PROTEIN
Paelopatides55644HYR DOMAIN-CONTAINING PROTEIN
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