About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides55501-
Paelopatides55502-
Paelopatides55503NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER
Paelopatides55504-
Paelopatides55505-
Paelopatides55506ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides55507ENZYMATIC POLYPROTEIN-RELATED
Paelopatides55508FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides55509FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides55510ALPHA-AMYLASE FAMILY MEMBER
Paelopatides55511TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN15
Paelopatides555124.1 G PROTEIN
Paelopatides55513RETROTRANSPOSON
Paelopatides55514AMINE OXIDASE
Paelopatides55515-
Paelopatides55516APOLIPOPROTEIN L
Paelopatides55517-
Paelopatides55518G-PROTEIN COUPLED RECEPTOR
Paelopatides55519ALPHA-2,8-SIALYLTRANSFERASE
Paelopatides55520ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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