About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides55603-
Paelopatides55604PROTEIN CBG26694
Paelopatides55605PROTEIN CBG26694
Paelopatides55606ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides55607ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides55608REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides55609REVERSE TRANSCRIPTASES
Paelopatides55610BUCENTAUR RELATED
Paelopatides55611CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides55612-
Paelopatides55613BEN DOMAIN-CONTAINING PROTEIN 6
Paelopatides55614DIMETHYLANILINE MONOOXYGENASE
Paelopatides55615-
Paelopatides55616SULFATE TRANSPORTER
Paelopatides55617-
Paelopatides55618-
Paelopatides55619-
Paelopatides55620RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED
Paelopatides55621-
Paelopatides55622NY-REN-58 ANTIGEN
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