About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides55739NOTCH LIGAND FAMILY MEMBER
Paelopatides55740DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
Paelopatides55741CCHC-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides55742PROTEIN CBG26694
Paelopatides55743UNCHARACTERIZED
Paelopatides55744LEUCINE ZIPPER PROTEIN 4-RELATED
Paelopatides55745UNCHARACTERIZED
Paelopatides55746AMNIONLESS
Paelopatides55747ANKYRIN REPEAT FAMILY PROTEIN
Paelopatides55748ACROSIN-RELATED
Paelopatides55749DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
Paelopatides55750ALPHA-2,8-SIALYLTRANSFERASE
Paelopatides55752PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides55753POL PROTEIN
Paelopatides55754-
Paelopatides55755CENTAURIN/ARF
Paelopatides55756-
Paelopatides55757ARYLSULFATASE
Paelopatides55758INTERFERON ALPHA-INDUCIBLE PROTEIN 27
Paelopatides55759-
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