The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000408l.29 | TUBULIN EPSILON AND DELTA COMPLEX PROTEIN 2 |
| PMEG.utg000408l.3 | WD40 REPEAT PROTEIN |
| PMEG.utg000408l.30 | SCAFFOLD ATTACHMENT FACTOR B-RELATED |
| PMEG.utg000408l.31 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| PMEG.utg000408l.32 | DNA-DIRECTED RNA POLYMERASE III |
| PMEG.utg000408l.33 | PITUITARY HOMEOBOX HOMOLOG PTX1 |
| PMEG.utg000408l.34 | DIENCEPHALON/MESENCEPHALON HOMEOBOX PROTEIN 1 |
| PMEG.utg000408l.35 | PROTEASE M1 ZINC METALLOPROTEASE |
| PMEG.utg000408l.36 | BETA-AMYLOID BINDING PROTEIN-RELATED |
| PMEG.utg000408l.37 | OPSIN |
| PMEG.utg000408l.38 | ANNEXIN |
| PMEG.utg000408l.39 | PROGRAMMED CELL DEATH PROTEIN 2-LIKE |
| PMEG.utg000408l.4 | DNA POLYMERASE DELTA SUBUNIT 2 |
| PMEG.utg000408l.40 | G BETA-LIKE PROTEIN GBL |
| PMEG.utg000408l.41 | BRAIN PROTEIN I3 |
| PMEG.utg000408l.42 | CELL DIVISION PROTEIN KINASE |
| PMEG.utg000408l.43 | SUPPRESSOR OF FUSED |
| PMEG.utg000408l.44 | REGULATORY-ASSOCIATED PROTEIN OF MTOR |
| PMEG.utg000408l.45 | POLYCYSTIN FAMILY MEMBER |
| PMEG.utg000408l.46 | LD02310P |
| PMEG.utg000408l.47 | RECEPTOR FOR ACTIVATED PROTEIN KINASE C RACK1 |
| PMEG.utg000408l.48 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
| PMEG.utg000408l.49 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| PMEG.utg000408l.5 | NUCLEAR DISTRIBUTION PROTEIN NUDE HOMOLOG 1 |
| PMEG.utg000408l.50 | PHD FINGER-LIKE DOMAIN-CONTAINING PROTEIN 5A |
| PMEG.utg000408l.51 | ACTIVATING TRANSCRIPTION FACTOR ATF 4/5 |
| PMEG.utg000408l.52 | ALCOHOL DEHYDROGENASE |
| PMEG.utg000408l.53 | CALCYPHOSIN |
| PMEG.utg000408l.54 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| PMEG.utg000408l.55 | ACONITATE HYDRATASE B |
| PMEG.utg000408l.56 | INTERFERON-INDUCED PROTEIN 44 |
| PMEG.utg000408l.57 | TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172 |
| PMEG.utg000408l.58 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
| PMEG.utg000408l.59 | ACROSIN-RELATED |
| PMEG.utg000408l.6 | IQ DOMAIN-CONTAINING PROTEIN K |
| PMEG.utg000408l.60 | NEUROPEPTIDE Y RECEPTOR |
| PMEG.utg000408l.62 | RNA-BINDING PROTEIN |
| PMEG.utg000408l.63 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| PMEG.utg000408l.64 | DYNACTIN SUBUNIT 5 |
| PMEG.utg000408l.65 | SEC24-RELATED PROTEIN |
| PMEG.utg000408l.66 | BCL2 INTERACTING MEDIATOR OF CELL DEATH |
| PMEG.utg000408l.67 | MYOSIN HEAVY CHAIN, NON-MUSCLE |
| PMEG.utg000408l.68 | |
| PMEG.utg000408l.69 | COILED-COIL DOMAIN-CONTAINING PROTEIN 57 |
| PMEG.utg000408l.7 | NATRIURETIC PEPTIDE RECEPTOR 3-RELATED |
| PMEG.utg000408l.70 | - |
| PMEG.utg000408l.71 | BRAIN-SPECIFIC ANGIOGENESIS INHIBITOR 1-ASSOCIATED PROTEIN 2 |
| PMEG.utg000408l.72 | |
| PMEG.utg000408l.73 | ACROSIN-RELATED |
| PMEG.utg000408l.74 |
