The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000408l.75 | SYNAPTOTAGMIN |
| PMEG.utg000408l.76 | TGF-BETA FAMILY |
| PMEG.utg000408l.77 | |
| PMEG.utg000408l.78 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 299 |
| PMEG.utg000408l.79 | TATA ELEMENT MODULATORY FACTOR TMF1 |
| PMEG.utg000408l.8 | GUANYLYL CYCLASE |
| PMEG.utg000408l.80 | MASK PROTEIN |
| PMEG.utg000408l.81 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-BINDING PROTEIN |
| PMEG.utg000408l.82 | |
| PMEG.utg000408l.83 | |
| PMEG.utg000408l.84 | |
| PMEG.utg000408l.85 | |
| PMEG.utg000408l.86 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
| PMEG.utg000408l.87 | NEUROPEPTIDE Y RECEPTOR |
| PMEG.utg000408l.88 | ARRESTIN DOMAIN CONTAINING PROTEIN |
| PMEG.utg000408l.89 | |
| PMEG.utg000408l.9 | TRICHOHYALIN-RELATED |
| PMEG.utg000408l.90 | NETRIN/LAMININ-RELATED |
| PMEG.utg000409l.1 | CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE |
| PMEG.utg000409l.2 | PROTEIN CBG20567 |
| PMEG.utg000409l.3 | ABC TRANSPORTER G FAMILY MEMBER 28 |
| PMEG.utg000409l.4 | LOQUACIOUS, ISOFORM B |
| PMEG.utg000409l.5 | MY011 PROTEIN |
| PMEG.utg000409l.6 | |
| PMEG.utg000410l.1 | CADHERIN-LIKE AND PC-ESTERASE DOMAIN-CONTAINING PROTEIN 1 |
| PMEG.utg000412l.1 | B-CELL RECEPTOR CD22 |
| PMEG.utg000412l.11 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
| PMEG.utg000412l.2 | NEPHRIN |
| PMEG.utg000412l.3 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000412l.4 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| PMEG.utg000412l.5 | G-PROTEIN COUPLED RECEPTOR 89-RELATED |
| PMEG.utg000412l.6 | |
| PMEG.utg000412l.7 | RETINOL DEHYDROGENASE |
| PMEG.utg000412l.8 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| PMEG.utg000412l.9 | TRNA MODIFICATION GTPASE GTPBP3 |
| PMEG.utg000413l.1 | G-PROTEIN COUPLED RECEPTOR 158-RELATED |
| PMEG.utg000413l.2 | MATRIN 3/NUCLEAR PROTEIN 220-RELATED |
| PMEG.utg000414l.1 | PUTATIVE-RELATED |
| PMEG.utg000414l.10 | RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED |
| PMEG.utg000414l.11 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 9 |
| PMEG.utg000414l.12 | SODIUM/HYDROGEN EXCHANGER |
| PMEG.utg000414l.13 | DNA HELICASE RECQ FAMILY MEMBER |
| PMEG.utg000414l.14 | |
| PMEG.utg000414l.15 | DYSTROBREVIN BINDING PROTEIN 1 DYSBINDIN |
| PMEG.utg000414l.16 | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B |
| PMEG.utg000414l.17 | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B |
| PMEG.utg000414l.18 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT |
| PMEG.utg000414l.19 | RING FINGER AND SRY DOMAIN-CONTAINING |
| PMEG.utg000414l.2 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
| PMEG.utg000414l.20 | RING FINGER AND SRY DOMAIN-CONTAINING |
