The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000390l.3 | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE |
| PMEG.utg000392l.1 | ANILLIN/RHOTEKIN RTKN |
| PMEG.utg000392l.2 | NUCLEAR RECEPTOR COACTIVATOR 5-RELATED |
| PMEG.utg000392l.3 | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN |
| PMEG.utg000392l.4 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
| PMEG.utg000392l.5 | GATOR COMPLEX PROTEIN WDR59 |
| PMEG.utg000392l.6 | DREV PROTEIN |
| PMEG.utg000393l.1 | FAT ATYPICAL CADHERIN-RELATED |
| PMEG.utg000393l.10 | VACUOLAR SORTING PROTEIN 35 |
| PMEG.utg000393l.11 | SYS1 |
| PMEG.utg000393l.12 | CYTOCHROME C OXIDASE SUBUNIT IV |
| PMEG.utg000393l.13 | RIKEN CDNA 6820408C15 |
| PMEG.utg000393l.2 | F-BOX FAMILY PROTEIN |
| PMEG.utg000393l.3 | EXOCYST COMPLEX COMPONENT SEC5 |
| PMEG.utg000393l.4 | ALANINE--GLYOXYLATE AMINOTRANSFERASE 2, MITOCHONDRIAL |
| PMEG.utg000393l.5 | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE |
| PMEG.utg000393l.6 | ATP-DEPENDENT RNA HELICASE |
| PMEG.utg000393l.8 | MALE FERTILITY FACTOR KL5 |
| PMEG.utg000393l.9 | ORIGIN RECOGNITION COMPLEX SUBUNIT 6 |
| PMEG.utg000394l.1 | CHITIN SYNTHASE |
| PMEG.utg000394l.2 | NADPH OXIDASE |
| PMEG.utg000394l.3 | CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 1 |
| PMEG.utg000395l.1 | ADENYLYL CYCLASE-ASSOCIATED PROTEIN |
| PMEG.utg000395l.2 | SER/THR PROTEIN KINASE-TRB |
| PMEG.utg000396l.1 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
| PMEG.utg000396l.10 | TETRASPANIN |
| PMEG.utg000396l.11 | PHOSPHOTRIESTERASE-RELATED |
| PMEG.utg000396l.12 | D-XYLOSE-PROTON SYMPORTER-LIKE 2 |
| PMEG.utg000396l.13 | PCNA-INTERACTING PARTNER |
| PMEG.utg000396l.14 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
| PMEG.utg000396l.15 | GLYCOSYLPHOSPHATIDYLINOSITOL PHOSPHOLIPASE D |
| PMEG.utg000396l.16 | GLYCOSYLPHOSPHATIDYLINOSITOL PHOSPHOLIPASE D |
| PMEG.utg000396l.17 | MITOGEN-ACTIVATED PROTEIN KINASE |
| PMEG.utg000396l.2 | TRIFUNCTIONAL ENZYME SUBUNIT ALPHA |
| PMEG.utg000396l.3 | ACETYL-COA C-ACYLTRANSFERASE |
| PMEG.utg000396l.4 | AAA DOMAIN-CONTAINING |
| PMEG.utg000396l.5 | - |
| PMEG.utg000396l.6 | TUDOR DOMAIN CONTAINING PROTEIN |
| PMEG.utg000396l.7 | TUDOR DOMAIN CONTAINING PROTEIN |
| PMEG.utg000396l.8 | TETRASPANIN |
| PMEG.utg000396l.9 | TETRASPANIN |
| PMEG.utg000397l.1 | |
| PMEG.utg000397l.2 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| PMEG.utg000397l.3 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| PMEG.utg000397l.4 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| PMEG.utg000397l.5 | PEPTIDASE |
| PMEG.utg000398l.1 | TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 5 |
| PMEG.utg000398l.2 | ZINC FINGER MYND DOMAIN-CONTAINING PROTEIN 12 |
| PMEG.utg000398l.3 | GUANYLYL CYCLASE |
| PMEG.utg000398l.4 | ELYS PROTEIN |
