The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000372l.1 | DNAJ HOMOLOG SUBFAMILY B MEMBER 9 |
PMEG.utg000372l.2 | CONTACTIN 5 |
PMEG.utg000372l.3 | MEMBRANE COMPONENT OF ABC TRANSPORTER YHHJ-RELATED |
PMEG.utg000372l.4 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
PMEG.utg000372l.5 | SMALL SEVEN TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN |
PMEG.utg000372l.6 | WD REPEAT DOMAIN-CONTAINING FAMILY |
PMEG.utg000372l.7 | TRIACYLGLYCEROL LIPASE |
PMEG.utg000374l.1 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
PMEG.utg000376l.1 | ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN |
PMEG.utg000376l.10 | AMMONIUM TRANSPORTER |
PMEG.utg000376l.2 | NADH DEHYDROGENASE |
PMEG.utg000376l.3 | RIBOSOMAL PROTEIN S19P FAMILY MEMBER |
PMEG.utg000376l.4 | 4.1 G PROTEIN |
PMEG.utg000376l.5 | |
PMEG.utg000376l.6 | |
PMEG.utg000376l.7 | |
PMEG.utg000376l.8 | SORTING NEXIN |
PMEG.utg000376l.9 | MACROGLOBULIN / COMPLEMENT |
PMEG.utg000377l.1 | TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 |
PMEG.utg000377l.2 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
PMEG.utg000377l.3 | CAVEOLIN |
PMEG.utg000377l.4 | BTB/POZ DOMAIN-CONTAINING PROTEIN 10-RELATED |
PMEG.utg000377l.5 | EXPRESSED PROTEIN |
PMEG.utg000377l.6 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
PMEG.utg000379l.1 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
PMEG.utg000379l.10 | NEUROTRANSMITTER GATED ION CHANNEL |
PMEG.utg000379l.11 | NEUROTRANSMITTER GATED ION CHANNEL |
PMEG.utg000379l.12 | SERINE/THREONINE-PROTEIN KINASE |
PMEG.utg000379l.13 | MEVALONATE KINASE/GALACTOKINASE |
PMEG.utg000379l.14 | ARRESTIN DOMAIN CONTAINING PROTEIN |
PMEG.utg000379l.15 | TB1 PROTEIN-RELATED |
PMEG.utg000379l.16 | GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETA |
PMEG.utg000379l.17 | SIMILAR TO KIAA0825 PROTEIN |
PMEG.utg000379l.18 | UNCHARACTERIZED |
PMEG.utg000379l.19 | CERAMIDE GLUCOSYLTRANSFERASE |
PMEG.utg000379l.2 | CELL DIVISION PROTEIN KINASE |
PMEG.utg000379l.20 | RAS GTPASE-ACTIVATING PROTEINS |
PMEG.utg000379l.21 | CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18 |
PMEG.utg000379l.22 | GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE |
PMEG.utg000379l.23 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED |
PMEG.utg000379l.24 | HVA22-LIKE PROTEINS |
PMEG.utg000379l.25 | CALPAIN |
PMEG.utg000379l.26 | COLLAGEN ALPHA |
PMEG.utg000379l.27 | TETRASPANIN |
PMEG.utg000379l.28 | ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL |
PMEG.utg000379l.29 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
PMEG.utg000379l.3 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED |
PMEG.utg000379l.30 | DET1 HOMOLOG DE-ETIOLATED-1 HOMOLOG |
PMEG.utg000379l.31 | KH DOMAIN CONTAINING RNA BINDING PROTEIN |
PMEG.utg000379l.33 | UNCHARACTERIZED |