The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000365l.8 | COLLAGEN ALPHA |
| PMEG.utg000365l.80 | CEREBELLIN-RELATED |
| PMEG.utg000365l.81 | CEREBELLIN-RELATED |
| PMEG.utg000365l.82 | IMPORTIN BETA |
| PMEG.utg000365l.83 | DNA PRIMASE SMALL SUBUNIT |
| PMEG.utg000365l.84 | ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER |
| PMEG.utg000365l.85 | OLIGOPEPTIDE TRANSPORTER-RELATED |
| PMEG.utg000365l.86 | G-PROTEIN COUPLED RECEPTOR |
| PMEG.utg000365l.87 | GOLGI REASSEMBLY STACKING PROTEIN GRASP |
| PMEG.utg000365l.88 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| PMEG.utg000365l.89 | CHITIN SYNTHASE |
| PMEG.utg000365l.9 | THROMBOSPONDIN-TYPE LAMININ G DOMAIN AND EAR REPEAT-CONTAINING |
| PMEG.utg000365l.90 | PYRAZINAMIDASE/NICOTINAMIDASE |
| PMEG.utg000365l.91 | CHITIN SYNTHASE |
| PMEG.utg000365l.92 | UBIQUITIN-ACTIVATING ENZYME E1 |
| PMEG.utg000365l.93 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
| PMEG.utg000365l.94 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| PMEG.utg000365l.95 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED |
| PMEG.utg000365l.96 | PROTEIN TORNADO 1 |
| PMEG.utg000365l.97 | |
| PMEG.utg000365l.98 | PROTEIN CASC3 |
| PMEG.utg000365l.99 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 65 |
| PMEG.utg000367l.1 | HELICASE WITH DEATH DOMAIN-RELATED |
| PMEG.utg000367l.2 | HELICASE WITH DEATH DOMAIN-RELATED |
| PMEG.utg000367l.3 | HELICASE WITH DEATH DOMAIN-RELATED |
| PMEG.utg000367l.4 | PERIOSTIN-RELATED |
| PMEG.utg000367l.5 | AGAP001705-PA |
| PMEG.utg000367l.6 | |
| PMEG.utg000367l.7 | PEROXISOMAL BIOGENESIS FACTOR 11 |
| PMEG.utg000369l.1 | METHYLTRANSFERASE |
| PMEG.utg000369l.10 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37 |
| PMEG.utg000369l.100 | GLYCOSYL HYDROLASE |
| PMEG.utg000369l.101 | |
| PMEG.utg000369l.102 | |
| PMEG.utg000369l.103 | |
| PMEG.utg000369l.104 | |
| PMEG.utg000369l.105 | |
| PMEG.utg000369l.106 | UNCHARACTERIZED |
| PMEG.utg000369l.107 | SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 2 |
| PMEG.utg000369l.108 | |
| PMEG.utg000369l.109 | RING ZINC FINGER |
| PMEG.utg000369l.11 | SI:CH211-201H21.5-RELATED |
| PMEG.utg000369l.110 | COLLAGEN ALPHA |
| PMEG.utg000369l.111 | |
| PMEG.utg000369l.112 | |
| PMEG.utg000369l.113 | |
| PMEG.utg000369l.114 | PBS LYASE HEAT-LIKE PROTEIN |
| PMEG.utg000369l.115 | UNCHARACTERIZED |
| PMEG.utg000369l.116 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR |
| PMEG.utg000369l.117 | SOLUTE CARRIER FAMILY 22 MEMBER |
